Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Sf3b6P59708 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.4□□□□□ -1.7
Sf3b6P59708 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Sf3b6P59708 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Sf3b6P59708 Gm23941-201ENSMUST00000101953 107 ntBASIC4.4□□□□□ -1.71
Sf3b6P59708 Mir676-201ENSMUST00000102443 89 ntBASIC4.4□□□□□ -1.71
Sf3b6P59708 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Sf3b6P59708 Mir466j-201ENSMUST00000116876 122 ntBASIC4.4□□□□□ -1.71
Sf3b6P59708 Gm13451-201ENSMUST00000117649 592 ntBASIC4.4□□□□□ -1.71
Sf3b6P59708 Gm13887-201ENSMUST00000119009 344 ntBASIC4.4□□□□□ -1.71
Sf3b6P59708 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.4□□□□□ -1.71
Sf3b6P59708 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC4.4□□□□□ -1.71
Sf3b6P59708 Gm11584-201ENSMUST00000120636 325 ntBASIC4.4□□□□□ -1.71
Sf3b6P59708 Gm15428-201ENSMUST00000121352 333 ntBASIC4.4□□□□□ -1.71
Sf3b6P59708 Gm26256-201ENSMUST00000122499 186 ntBASIC4.4□□□□□ -1.71
Sf3b6P59708 Gm22839-201ENSMUST00000158436 304 ntBASIC4.4□□□□□ -1.71
Sf3b6P59708 Gm22435-201ENSMUST00000158552 128 ntBASIC4.4□□□□□ -1.71
Sf3b6P59708 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC4.4□□□□□ -1.71
Sf3b6P59708 Gm25360-201ENSMUST00000178786 191 ntBASIC4.4□□□□□ -1.71
Sf3b6P59708 Gm22448-201ENSMUST00000179254 107 ntBASIC4.4□□□□□ -1.71
Sf3b6P59708 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sf3b6P59708 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC4.4□□□□□ -1.71
Sf3b6P59708 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC4.4□□□□□ -1.71
Sf3b6P59708 Ighv1-35-201ENSMUST00000195265 351 ntBASIC4.4□□□□□ -1.71
Sf3b6P59708 Gm37029-201ENSMUST00000195773 239 ntBASIC4.4□□□□□ -1.71
Sf3b6P59708 Trav5d-2-201ENSMUST00000196107 275 ntBASIC4.4□□□□□ -1.71
Sf3b6P59708 Trav5n-2-201ENSMUST00000197136 275 ntBASIC4.4□□□□□ -1.71
Sf3b6P59708 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC4.4□□□□□ -1.71
Sf3b6P59708 Gm44523-201ENSMUST00000205616 417 ntBASIC4.4□□□□□ -1.71
Sf3b6P59708 Gm45395-201ENSMUST00000209891 559 ntBASIC4.4□□□□□ -1.71
Sf3b6P59708 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC4.4□□□□□ -1.71
Sf3b6P59708 Gm45815-201ENSMUST00000220241 146 ntBASIC4.4□□□□□ -1.71
Sf3b6P59708 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.4□□□□□ -1.71
Sf3b6P59708 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sf3b6P59708 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC4.4□□□□□ -1.71
Sf3b6P59708 AC241593.2-201ENSMUST00000225099 510 ntBASIC4.4□□□□□ -1.71
Sf3b6P59708 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC4.4□□□□□ -1.71
Sf3b6P59708 Gm23721-201ENSMUST00000083005 107 ntBASIC4.4□□□□□ -1.71
Sf3b6P59708 Gm22974-201ENSMUST00000083301 103 ntBASIC4.4□□□□□ -1.71
Sf3b6P59708 Mir129-1-201ENSMUST00000083535 73 ntBASIC4.4□□□□□ -1.71
Sf3b6P59708 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.4□□□□□ -1.71
Sf3b6P59708 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sf3b6P59708 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sf3b6P59708 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sf3b6P59708 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sf3b6P59708 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.4□□□□□ -1.71
Sf3b6P59708 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC4.4□□□□□ -1.71
Sf3b6P59708 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Sf3b6P59708 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sf3b6P59708 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Sf3b6P59708 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sf3b6P59708 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sf3b6P59708 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sf3b6P59708 AC158805.1-201ENSMUST00000218197 2631 ntBASIC4.4□□□□□ -1.71
Sf3b6P59708 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sf3b6P59708 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Sf3b6P59708 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Sf3b6P59708 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Sf3b6P59708 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Sf3b6P59708 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Sf3b6P59708 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Sf3b6P59708 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Sf3b6P59708 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Sf3b6P59708 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Sf3b6P59708 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Sf3b6P59708 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
Sf3b6P59708 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Sf3b6P59708 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Sf3b6P59708 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC4.39□□□□□ -1.71
Sf3b6P59708 Gm12423-201ENSMUST00000118334 135 ntBASIC4.39□□□□□ -1.71
Sf3b6P59708 Gm15803-201ENSMUST00000120118 394 ntBASIC4.39□□□□□ -1.71
Sf3b6P59708 Gm12087-201ENSMUST00000121878 258 ntBASIC4.39□□□□□ -1.71
Sf3b6P59708 Gm15075-201ENSMUST00000122187 477 ntBASIC4.39□□□□□ -1.71
Sf3b6P59708 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
Sf3b6P59708 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC4.39□□□□□ -1.71
Sf3b6P59708 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC4.39□□□□□ -1.71
Sf3b6P59708 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC4.39□□□□□ -1.71
Sf3b6P59708 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC4.39□□□□□ -1.71
Sf3b6P59708 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC4.39□□□□□ -1.71
Sf3b6P59708 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC4.39□□□□□ -1.71
Sf3b6P59708 Gm27999-201ENSMUST00000183539 193 ntBASIC4.39□□□□□ -1.71
Sf3b6P59708 Gm29352-201ENSMUST00000188054 544 ntBASIC4.39□□□□□ -1.71
Sf3b6P59708 Gm18357-201ENSMUST00000188184 580 ntBASIC4.39□□□□□ -1.71
Sf3b6P59708 Gm28429-201ENSMUST00000188521 363 ntBASIC4.39□□□□□ -1.71
Sf3b6P59708 Gm19498-201ENSMUST00000191128 331 ntBASIC4.39□□□□□ -1.71
Sf3b6P59708 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC4.39□□□□□ -1.71
Sf3b6P59708 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.39□□□□□ -1.71
Sf3b6P59708 Igkv15-101-201ENSMUST00000195917 299 ntBASIC4.39□□□□□ -1.71
Sf3b6P59708 Gm36548-201ENSMUST00000197473 685 ntTSL 5 BASIC4.39□□□□□ -1.71
Sf3b6P59708 Gm33952-201ENSMUST00000197795 408 ntBASIC4.39□□□□□ -1.71
Sf3b6P59708 Igkv4-56-201ENSMUST00000198436 349 ntBASIC4.39□□□□□ -1.71
Sf3b6P59708 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Sf3b6P59708 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC4.39□□□□□ -1.71
Sf3b6P59708 Gm7407-201ENSMUST00000208301 568 ntBASIC4.39□□□□□ -1.71
Sf3b6P59708 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC4.39□□□□□ -1.71
Sf3b6P59708 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Sf3b6P59708 Gm2710-201ENSMUST00000073196 603 ntBASIC4.39□□□□□ -1.71
Sf3b6P59708 Gm24611-201ENSMUST00000083272 107 ntBASIC4.39□□□□□ -1.71
Sf3b6P59708 Gm22155-201ENSMUST00000083836 162 ntBASIC4.39□□□□□ -1.71
Sf3b6P59708 Gm45129-201ENSMUST00000208444 2224 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms