Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm22192-201ENSMUST00000175128 85 ntBASIC3.7□□□□□ -1.82
Cux1P53564 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC3.7□□□□□ -1.82
Cux1P53564 Gm43587-201ENSMUST00000199590 204 ntBASIC3.7□□□□□ -1.82
Cux1P53564 Gm44431-201ENSMUST00000203500 413 ntBASIC3.7□□□□□ -1.82
Cux1P53564 Gm36247-201ENSMUST00000211834 285 ntBASIC3.7□□□□□ -1.82
Cux1P53564 AC133934.2-201ENSMUST00000221729 4129 ntBASIC3.7□□□□□ -1.82
Cux1P53564 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.7□□□□□ -1.82
Cux1P53564 CT030135.1-201ENSMUST00000223760 570 ntBASIC3.7□□□□□ -1.82
Cux1P53564 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.7□□□□□ -1.82
Cux1P53564 AC117202.3-201ENSMUST00000228532 310 ntBASIC3.7□□□□□ -1.82
Cux1P53564 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Cux1P53564 Gm25632-201ENSMUST00000083112 85 ntBASIC3.7□□□□□ -1.82
Cux1P53564 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
Cux1P53564 Gm37602-201ENSMUST00000195187 3310 ntBASIC3.69□□□□□ -1.82
Cux1P53564 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
Cux1P53564 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Cux1P53564 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Cux1P53564 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC3.69□□□□□ -1.82
Cux1P53564 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC3.69□□□□□ -1.82
Cux1P53564 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC3.69□□□□□ -1.82
Cux1P53564 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC3.69□□□□□ -1.82
Cux1P53564 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Cux1P53564 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Cux1P53564 Mir322-201ENSMUST00000083484 95 ntBASIC3.69□□□□□ -1.82
Cux1P53564 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Cux1P53564 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.69□□□□□ -1.82
Cux1P53564 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
Cux1P53564 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Cux1P53564 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC3.68□□□□□ -1.82
Cux1P53564 Gm18843-201ENSMUST00000194982 719 ntBASIC3.68□□□□□ -1.82
Cux1P53564 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC3.68□□□□□ -1.82
Cux1P53564 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.67□□□□□ -1.82
Cux1P53564 Gm38255-201ENSMUST00000194910 2996 ntBASIC3.67□□□□□ -1.82
Cux1P53564 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC3.67□□□□□ -1.82
Cux1P53564 Gm13728-201ENSMUST00000117471 400 ntBASIC3.67□□□□□ -1.82
Cux1P53564 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC3.67□□□□□ -1.82
Cux1P53564 AC123533.1-201ENSMUST00000227782 446 ntBASIC3.67□□□□□ -1.82
Cux1P53564 AC123658.1-201ENSMUST00000228364 867 ntBASIC3.67□□□□□ -1.82
Cux1P53564 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.67□□□□□ -1.82
Cux1P53564 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Cux1P53564 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Cux1P53564 Gm25094-201ENSMUST00000103992 131 ntBASIC3.66□□□□□ -1.82
Cux1P53564 Gm21990-201ENSMUST00000124692 383 ntBASIC3.66□□□□□ -1.82
Cux1P53564 4930519F16Rik-202ENSMUST00000127012 685 ntTSL 3 BASIC3.66□□□□□ -1.82
Cux1P53564 Gm24771-201ENSMUST00000158508 137 ntBASIC3.66□□□□□ -1.82
Cux1P53564 Gm44903-201ENSMUST00000206840 130 ntBASIC3.66□□□□□ -1.82
Cux1P53564 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Cux1P53564 Gm9174-201ENSMUST00000078149 255 ntBASIC3.66□□□□□ -1.82
Cux1P53564 Gm43540-201ENSMUST00000196320 3848 ntBASIC3.66□□□□□ -1.82
Cux1P53564 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC3.66□□□□□ -1.82
Cux1P53564 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Cux1P53564 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Cux1P53564 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Cux1P53564 Gm18493-201ENSMUST00000192084 1612 ntBASIC3.65□□□□□ -1.82
Cux1P53564 Gm12849-201ENSMUST00000120013 739 ntBASIC3.65□□□□□ -1.82
Cux1P53564 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC3.65□□□□□ -1.82
Cux1P53564 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
Cux1P53564 Gm27535-201ENSMUST00000183814 157 ntBASIC3.65□□□□□ -1.82
Cux1P53564 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
Cux1P53564 Gm9696-202ENSMUST00000191541 830 ntBASIC3.65□□□□□ -1.82
Cux1P53564 Gm21847-202ENSMUST00000198681 883 ntTSL 5 BASIC3.65□□□□□ -1.82
Cux1P53564 Gm43083-201ENSMUST00000199594 476 ntBASIC3.65□□□□□ -1.82
Cux1P53564 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC3.65□□□□□ -1.82
Cux1P53564 AC159472.1-201ENSMUST00000218178 463 ntBASIC3.65□□□□□ -1.82
Cux1P53564 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC3.65□□□□□ -1.82
Cux1P53564 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.65□□□□□ -1.82
Cux1P53564 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.65□□□□□ -1.82
Cux1P53564 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Cux1P53564 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC3.65□□□□□ -1.83
Cux1P53564 Gm12941-201ENSMUST00000117934 220 ntBASIC3.65□□□□□ -1.83
Cux1P53564 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC3.65□□□□□ -1.83
Cux1P53564 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Cux1P53564 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.65□□□□□ -1.83
Cux1P53564 Gm18043-201ENSMUST00000216741 739 ntBASIC3.65□□□□□ -1.83
Cux1P53564 Olfr790-204ENSMUST00000218901 1070 ntBASIC3.65□□□□□ -1.83
Cux1P53564 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Cux1P53564 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC3.65□□□□□ -1.83
Cux1P53564 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.65□□□□□ -1.83
Cux1P53564 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Cux1P53564 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Cux1P53564 Hmgb1l-201ENSMUST00000082150 571 ntBASIC3.65□□□□□ -1.83
Cux1P53564 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Cux1P53564 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.64□□□□□ -1.83
Cux1P53564 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Cux1P53564 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Cux1P53564 Gm23766-201ENSMUST00000103894 80 ntBASIC3.64□□□□□ -1.83
Cux1P53564 Gm22803-201ENSMUST00000158049 283 ntBASIC3.64□□□□□ -1.83
Cux1P53564 Gm29610-201ENSMUST00000187749 453 ntBASIC3.64□□□□□ -1.83
Cux1P53564 Gm28639-201ENSMUST00000191519 481 ntBASIC3.64□□□□□ -1.83
Cux1P53564 Gm44060-201ENSMUST00000204440 410 ntBASIC3.64□□□□□ -1.83
Cux1P53564 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC3.64□□□□□ -1.83
Cux1P53564 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.64□□□□□ -1.83
Cux1P53564 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Cux1P53564 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC3.64□□□□□ -1.83
Cux1P53564 Gm46389-201ENSMUST00000223199 392 ntBASIC3.64□□□□□ -1.83
Cux1P53564 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.64□□□□□ -1.83
Cux1P53564 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Cux1P53564 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Cux1P53564 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Cux1P53564 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 98 ms