Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Rfx1P48377 Mir3110-201ENSMUST00000175053 80 ntBASIC5.61□□□□□ -1.51
Rfx1P48377 Gm16378-201ENSMUST00000179168 342 ntBASIC5.61□□□□□ -1.51
Rfx1P48377 Mir6903-201ENSMUST00000183597 88 ntBASIC5.61□□□□□ -1.51
Rfx1P48377 Gm27409-201ENSMUST00000184727 80 ntBASIC5.61□□□□□ -1.51
Rfx1P48377 Gm8600-201ENSMUST00000186320 905 ntBASIC5.61□□□□□ -1.51
Rfx1P48377 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Rfx1P48377 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Rfx1P48377 Gm38125-201ENSMUST00000194136 3438 ntBASIC5.61□□□□□ -1.51
Rfx1P48377 Gm37192-201ENSMUST00000194479 1348 ntBASIC5.61□□□□□ -1.51
Rfx1P48377 Gm42643-201ENSMUST00000200504 279 ntBASIC5.61□□□□□ -1.51
Rfx1P48377 Gm42579-201ENSMUST00000200512 734 ntBASIC5.61□□□□□ -1.51
Rfx1P48377 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Rfx1P48377 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC5.61□□□□□ -1.51
Rfx1P48377 Gm44765-201ENSMUST00000206927 601 ntBASIC5.61□□□□□ -1.51
Rfx1P48377 Gm44858-201ENSMUST00000207360 154 ntBASIC5.61□□□□□ -1.51
Rfx1P48377 Gm45344-201ENSMUST00000211610 341 ntBASIC5.61□□□□□ -1.51
Rfx1P48377 AC138284.5-201ENSMUST00000214389 652 ntBASIC5.61□□□□□ -1.51
Rfx1P48377 AC161884.2-201ENSMUST00000224513 227 ntBASIC5.61□□□□□ -1.51
Rfx1P48377 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Rfx1P48377 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Rfx1P48377 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Rfx1P48377 Mir218-2-201ENSMUST00000083649 110 ntBASIC5.61□□□□□ -1.51
Rfx1P48377 Gm7676-201ENSMUST00000084055 319 ntBASIC5.61□□□□□ -1.51
Rfx1P48377 Mir452-201ENSMUST00000093629 85 ntBASIC5.61□□□□□ -1.51
Rfx1P48377 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Rfx1P48377 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Rfx1P48377 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Rfx1P48377 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Rfx1P48377 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx1P48377 Gm45697-201ENSMUST00000212893 2876 ntBASIC5.6□□□□□ -1.51
Rfx1P48377 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx1P48377 Gm23274-201ENSMUST00000104056 130 ntBASIC5.6□□□□□ -1.51
Rfx1P48377 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC5.6□□□□□ -1.51
Rfx1P48377 Gm24409-201ENSMUST00000157881 152 ntBASIC5.6□□□□□ -1.51
Rfx1P48377 Gm22725-201ENSMUST00000158092 110 ntBASIC5.6□□□□□ -1.51
Rfx1P48377 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC5.6□□□□□ -1.51
Rfx1P48377 Gm5258-201ENSMUST00000165437 327 ntBASIC5.6□□□□□ -1.51
Rfx1P48377 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC5.6□□□□□ -1.51
Rfx1P48377 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx1P48377 Gm37681-201ENSMUST00000193880 727 ntBASIC5.6□□□□□ -1.51
Rfx1P48377 Gm2522-201ENSMUST00000204280 322 ntBASIC5.6□□□□□ -1.51
Rfx1P48377 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC5.6□□□□□ -1.51
Rfx1P48377 Gm45730-201ENSMUST00000212560 395 ntBASIC5.6□□□□□ -1.51
Rfx1P48377 Gm45814-201ENSMUST00000212646 775 ntBASIC5.6□□□□□ -1.51
Rfx1P48377 AC158803.1-201ENSMUST00000219495 316 ntBASIC5.6□□□□□ -1.51
Rfx1P48377 AC159231.1-201ENSMUST00000225365 226 ntBASIC5.6□□□□□ -1.51
Rfx1P48377 Snord68-201ENSMUST00000082516 86 ntBASIC5.6□□□□□ -1.51
Rfx1P48377 Gm24525-201ENSMUST00000082917 151 ntBASIC5.6□□□□□ -1.51
Rfx1P48377 Gm25140-201ENSMUST00000083254 140 ntBASIC5.6□□□□□ -1.51
Rfx1P48377 Gm24522-201ENSMUST00000083964 108 ntBASIC5.6□□□□□ -1.51
Rfx1P48377 n-R5s13-201ENSMUST00000093707 119 ntBASIC5.6□□□□□ -1.51
Rfx1P48377 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx1P48377 Gm38253-201ENSMUST00000194058 4678 ntBASIC5.6□□□□□ -1.51
Rfx1P48377 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx1P48377 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Rfx1P48377 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Rfx1P48377 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Rfx1P48377 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Rfx1P48377 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Rfx1P48377 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Rfx1P48377 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Rfx1P48377 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Rfx1P48377 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Rfx1P48377 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Rfx1P48377 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC5.59□□□□□ -1.51
Rfx1P48377 Gm12137-201ENSMUST00000119565 346 ntBASIC5.59□□□□□ -1.51
Rfx1P48377 Gm14559-201ENSMUST00000121745 496 ntBASIC5.59□□□□□ -1.51
Rfx1P48377 Gm14694-201ENSMUST00000121856 282 ntBASIC5.59□□□□□ -1.51
Rfx1P48377 Gm12650-201ENSMUST00000121966 258 ntBASIC5.59□□□□□ -1.51
Rfx1P48377 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC5.59□□□□□ -1.51
Rfx1P48377 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC5.59□□□□□ -1.51
Rfx1P48377 Gm25621-201ENSMUST00000157223 114 ntBASIC5.59□□□□□ -1.51
Rfx1P48377 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Rfx1P48377 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC5.59□□□□□ -1.51
Rfx1P48377 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Rfx1P48377 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC5.59□□□□□ -1.51
Rfx1P48377 Gm23725-201ENSMUST00000177876 107 ntBASIC5.59□□□□□ -1.51
Rfx1P48377 Gm26622-201ENSMUST00000180520 298 ntBASIC5.59□□□□□ -1.51
Rfx1P48377 Gm28943-201ENSMUST00000186187 615 ntBASIC5.59□□□□□ -1.51
Rfx1P48377 Gm28736-201ENSMUST00000186257 615 ntBASIC5.59□□□□□ -1.51
Rfx1P48377 Gm29401-201ENSMUST00000186690 615 ntBASIC5.59□□□□□ -1.51
Rfx1P48377 Gm29178-204ENSMUST00000186784 615 ntBASIC5.59□□□□□ -1.51
Rfx1P48377 Gm28589-201ENSMUST00000186991 615 ntBASIC5.59□□□□□ -1.51
Rfx1P48377 Gm28936-201ENSMUST00000187153 615 ntBASIC5.59□□□□□ -1.51
Rfx1P48377 Gm29121-201ENSMUST00000187611 615 ntBASIC5.59□□□□□ -1.51
Rfx1P48377 Gm28243-201ENSMUST00000187801 615 ntBASIC5.59□□□□□ -1.51
Rfx1P48377 Gm28844-202ENSMUST00000187977 615 ntBASIC5.59□□□□□ -1.51
Rfx1P48377 Gm29058-201ENSMUST00000189510 615 ntBASIC5.59□□□□□ -1.51
Rfx1P48377 Gm29624-201ENSMUST00000190018 615 ntBASIC5.59□□□□□ -1.51
Rfx1P48377 Gm28780-201ENSMUST00000190223 615 ntBASIC5.59□□□□□ -1.51
Rfx1P48377 Gm28969-211ENSMUST00000190992 615 ntBASIC5.59□□□□□ -1.51
Rfx1P48377 Gm28990-207ENSMUST00000191219 615 ntBASIC5.59□□□□□ -1.51
Rfx1P48377 Gm36468-201ENSMUST00000192119 615 ntBASIC5.59□□□□□ -1.51
Rfx1P48377 Gm31572-201ENSMUST00000193341 615 ntBASIC5.59□□□□□ -1.51
Rfx1P48377 Gm30175-201ENSMUST00000194173 615 ntBASIC5.59□□□□□ -1.51
Rfx1P48377 Gm20056-201ENSMUST00000194813 519 ntBASIC5.59□□□□□ -1.51
Rfx1P48377 Gm30858-201ENSMUST00000195516 615 ntBASIC5.59□□□□□ -1.51
Rfx1P48377 Gm43144-201ENSMUST00000198256 485 ntBASIC5.59□□□□□ -1.51
Rfx1P48377 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms