Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm24982-201ENSMUST00000104456 132 ntBASIC4.07□□□□□ -1.76
Traf1P39428 Gm23609-201ENSMUST00000104542 127 ntBASIC4.07□□□□□ -1.76
Traf1P39428 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC4.07□□□□□ -1.76
Traf1P39428 Gm9785-202ENSMUST00000144563 593 ntBASIC4.07□□□□□ -1.76
Traf1P39428 Gm22561-201ENSMUST00000157331 84 ntBASIC4.07□□□□□ -1.76
Traf1P39428 Gm23865-201ENSMUST00000157723 97 ntBASIC4.07□□□□□ -1.76
Traf1P39428 Gm23505-201ENSMUST00000158989 130 ntBASIC4.07□□□□□ -1.76
Traf1P39428 Gm20648-201ENSMUST00000175815 328 ntBASIC4.07□□□□□ -1.76
Traf1P39428 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC4.07□□□□□ -1.76
Traf1P39428 Gm6900-201ENSMUST00000178971 342 ntBASIC4.07□□□□□ -1.76
Traf1P39428 Gm28688-201ENSMUST00000187301 268 ntBASIC4.07□□□□□ -1.76
Traf1P39428 Gm37701-201ENSMUST00000192947 1100 ntBASIC4.07□□□□□ -1.76
Traf1P39428 Gm38076-201ENSMUST00000193889 450 ntBASIC4.07□□□□□ -1.76
Traf1P39428 Gm45063-201ENSMUST00000203726 472 ntBASIC4.07□□□□□ -1.76
Traf1P39428 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC4.07□□□□□ -1.76
Traf1P39428 AC158392.2-201ENSMUST00000225402 969 ntBASIC4.07□□□□□ -1.76
Traf1P39428 AC164883.9-201ENSMUST00000228042 399 ntBASIC4.07□□□□□ -1.76
Traf1P39428 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Traf1P39428 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC4.07□□□□□ -1.76
Traf1P39428 Gm42888-201ENSMUST00000202425 4361 ntBASIC4.06□□□□□ -1.76
Traf1P39428 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
Traf1P39428 Gm14687-201ENSMUST00000120206 363 ntBASIC4.06□□□□□ -1.76
Traf1P39428 Gm14238-201ENSMUST00000120227 323 ntBASIC4.06□□□□□ -1.76
Traf1P39428 Gm15719-201ENSMUST00000120619 635 ntBASIC4.06□□□□□ -1.76
Traf1P39428 Mir3112-201ENSMUST00000175431 82 ntBASIC4.06□□□□□ -1.76
Traf1P39428 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC4.06□□□□□ -1.76
Traf1P39428 Npn2-202ENSMUST00000189275 235 ntBASIC4.06□□□□□ -1.76
Traf1P39428 Gm6321-201ENSMUST00000194460 1090 ntBASIC4.06□□□□□ -1.76
Traf1P39428 Gm44513-201ENSMUST00000206811 439 ntBASIC4.06□□□□□ -1.76
Traf1P39428 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Traf1P39428 Gm23939-201ENSMUST00000082880 133 ntBASIC4.06□□□□□ -1.76
Traf1P39428 Gm22864-201ENSMUST00000083950 130 ntBASIC4.06□□□□□ -1.76
Traf1P39428 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Traf1P39428 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Traf1P39428 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Traf1P39428 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Traf1P39428 Gm9911-201ENSMUST00000211467 2802 ntBASIC4.06□□□□□ -1.76
Traf1P39428 CT025577.1-201ENSMUST00000220862 2846 ntBASIC4.06□□□□□ -1.76
Traf1P39428 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Traf1P39428 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Traf1P39428 AC161254.1-201ENSMUST00000220310 3842 ntBASIC4.05□□□□□ -1.76
Traf1P39428 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Traf1P39428 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
Traf1P39428 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
Traf1P39428 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Traf1P39428 Gm24120-201ENSMUST00000103978 129 ntBASIC4.05□□□□□ -1.76
Traf1P39428 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Traf1P39428 Gm14811-201ENSMUST00000117070 117 ntBASIC4.05□□□□□ -1.76
Traf1P39428 Gm12025-201ENSMUST00000117768 144 ntBASIC4.05□□□□□ -1.76
Traf1P39428 Gm11913-201ENSMUST00000119094 336 ntBASIC4.05□□□□□ -1.76
Traf1P39428 Gm13502-201ENSMUST00000121574 684 ntBASIC4.05□□□□□ -1.76
Traf1P39428 Gm23168-201ENSMUST00000157156 143 ntBASIC4.05□□□□□ -1.76
Traf1P39428 Gm16569-201ENSMUST00000160526 314 ntBASIC4.05□□□□□ -1.76
Traf1P39428 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC4.05□□□□□ -1.76
Traf1P39428 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Traf1P39428 Gm37578-201ENSMUST00000192256 1177 ntBASIC4.05□□□□□ -1.76
Traf1P39428 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC4.05□□□□□ -1.76
Traf1P39428 Gm19620-201ENSMUST00000195972 434 ntBASIC4.05□□□□□ -1.76
Traf1P39428 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Traf1P39428 Gm35570-201ENSMUST00000198730 681 ntBASIC4.05□□□□□ -1.76
Traf1P39428 Gm44274-201ENSMUST00000203417 256 ntBASIC4.05□□□□□ -1.76
Traf1P39428 Gm44727-201ENSMUST00000204225 451 ntBASIC4.05□□□□□ -1.76
Traf1P39428 Gm44118-201ENSMUST00000204665 229 ntBASIC4.05□□□□□ -1.76
Traf1P39428 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC4.05□□□□□ -1.76
Traf1P39428 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC4.05□□□□□ -1.76
Traf1P39428 AC117588.3-201ENSMUST00000228517 325 ntBASIC4.05□□□□□ -1.76
Traf1P39428 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Traf1P39428 Gm9818-201ENSMUST00000050900 255 ntBASIC4.05□□□□□ -1.76
Traf1P39428 Mir421-201ENSMUST00000083575 76 ntBASIC4.05□□□□□ -1.76
Traf1P39428 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Traf1P39428 Gm43881-201ENSMUST00000203051 2530 ntBASIC4.05□□□□□ -1.76
Traf1P39428 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Traf1P39428 Gm8473-201ENSMUST00000176697 1885 ntBASIC4.05□□□□□ -1.76
Traf1P39428 Gm43092-201ENSMUST00000202986 1854 ntBASIC4.05□□□□□ -1.76
Traf1P39428 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Traf1P39428 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Traf1P39428 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Traf1P39428 AC153887.2-201ENSMUST00000219160 3838 ntBASIC4.04□□□□□ -1.76
Traf1P39428 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Traf1P39428 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Traf1P39428 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC4.04□□□□□ -1.76
Traf1P39428 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Traf1P39428 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Traf1P39428 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Traf1P39428 Gm15176-201ENSMUST00000117734 135 ntBASIC4.04□□□□□ -1.76
Traf1P39428 Gm11429-201ENSMUST00000119089 144 ntBASIC4.04□□□□□ -1.76
Traf1P39428 Gm13603-201ENSMUST00000119404 83 ntBASIC4.04□□□□□ -1.76
Traf1P39428 Gm12578-201ENSMUST00000121244 417 ntBASIC4.04□□□□□ -1.76
Traf1P39428 n-R5s179-201ENSMUST00000122564 118 ntBASIC4.04□□□□□ -1.76
Traf1P39428 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC4.04□□□□□ -1.76
Traf1P39428 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC4.04□□□□□ -1.76
Traf1P39428 Gm24061-201ENSMUST00000157489 120 ntBASIC4.04□□□□□ -1.76
Traf1P39428 Gm25557-201ENSMUST00000158084 315 ntBASIC4.04□□□□□ -1.76
Traf1P39428 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Traf1P39428 Gm28141-201ENSMUST00000186676 342 ntBASIC4.04□□□□□ -1.76
Traf1P39428 Gm29452-201ENSMUST00000187996 313 ntBASIC4.04□□□□□ -1.76
Traf1P39428 Gm28860-201ENSMUST00000188103 313 ntBASIC4.04□□□□□ -1.76
Traf1P39428 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Traf1P39428 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Traf1P39428 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC4.04□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms