Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC5.33□□□□□ -1.56
Msx1P13297 Gm37482-201ENSMUST00000194899 2791 ntBASIC5.33□□□□□ -1.56
Msx1P13297 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Msx1P13297 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Msx1P13297 Gm38351-201ENSMUST00000195466 2518 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Msx1P13297 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Msx1P13297 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Msx1P13297 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Msx1P13297 Gm24132-201ENSMUST00000104745 91 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Gm14880-201ENSMUST00000117581 292 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Gm8595-201ENSMUST00000118250 630 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Gm12191-201ENSMUST00000118307 348 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Gm14871-201ENSMUST00000119056 194 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Gm9703-201ENSMUST00000119573 343 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Gm12640-201ENSMUST00000120097 310 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Gm11584-201ENSMUST00000120636 325 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC5.32□□□□□ -1.56
Msx1P13297 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC5.32□□□□□ -1.56
Msx1P13297 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.32□□□□□ -1.56
Msx1P13297 Gm25621-201ENSMUST00000157223 114 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Gm25392-201ENSMUST00000157335 297 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Gm23965-201ENSMUST00000157969 142 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Msx1P13297 Gm23571-201ENSMUST00000180073 127 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC5.32□□□□□ -1.56
Msx1P13297 Gm28976-201ENSMUST00000188070 144 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Ighv1-32-201ENSMUST00000195149 351 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Gm18341-201ENSMUST00000197538 622 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Msx1P13297 Gm35648-201ENSMUST00000202304 475 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC5.32□□□□□ -1.56
Msx1P13297 Gm29774-201ENSMUST00000219270 436 ntBASIC5.32□□□□□ -1.56
Msx1P13297 AL807824.1-201ENSMUST00000223151 183 ntBASIC5.32□□□□□ -1.56
Msx1P13297 AC157772.2-201ENSMUST00000228202 259 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Gm22685-201ENSMUST00000082848 106 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Gm23138-201ENSMUST00000083365 103 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Gm23095-201ENSMUST00000083446 107 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Gm10343-201ENSMUST00000096279 348 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Msx1P13297 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Msx1P13297 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Msx1P13297 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.32□□□□□ -1.56
Msx1P13297 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Msx1P13297 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Msx1P13297 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Msx1P13297 Gm5844-201ENSMUST00000119417 2191 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Gm37900-201ENSMUST00000195510 3805 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Gm10033-201ENSMUST00000072427 1813 ntBASIC5.32□□□□□ -1.56
Msx1P13297 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Msx1P13297 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Msx1P13297 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Msx1P13297 CT025686.2-201ENSMUST00000227898 3315 ntBASIC5.31□□□□□ -1.56
Msx1P13297 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Msx1P13297 Gm43361-201ENSMUST00000196562 4690 ntBASIC5.31□□□□□ -1.56
Msx1P13297 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Msx1P13297 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Msx1P13297 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.31□□□□□ -1.56
Msx1P13297 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Msx1P13297 Snord19-201ENSMUST00000104609 76 ntBASIC5.31□□□□□ -1.56
Msx1P13297 Gm14562-201ENSMUST00000129885 543 ntBASIC5.31□□□□□ -1.56
Msx1P13297 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC5.31□□□□□ -1.56
Msx1P13297 Gm25227-201ENSMUST00000158204 112 ntBASIC5.31□□□□□ -1.56
Msx1P13297 Gm17511-201ENSMUST00000172206 342 ntBASIC5.31□□□□□ -1.56
Msx1P13297 Gm25024-201ENSMUST00000179667 104 ntBASIC5.31□□□□□ -1.56
Msx1P13297 Mir6417-201ENSMUST00000183815 116 ntBASIC5.31□□□□□ -1.56
Msx1P13297 Gm1833-201ENSMUST00000191608 682 ntBASIC5.31□□□□□ -1.56
Msx1P13297 Gm44132-201ENSMUST00000205142 151 ntBASIC5.31□□□□□ -1.56
Msx1P13297 Gm8319-201ENSMUST00000205708 641 ntBASIC5.31□□□□□ -1.56
Msx1P13297 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC5.31□□□□□ -1.56
Msx1P13297 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Msx1P13297 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Msx1P13297 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Msx1P13297 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Msx1P13297 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Msx1P13297 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Msx1P13297 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Msx1P13297 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Msx1P13297 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Msx1P13297 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Msx1P13297 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Msx1P13297 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
Msx1P13297 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Msx1P13297 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.3□□□□□ -1.56
Msx1P13297 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Msx1P13297 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Msx1P13297 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Msx1P13297 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC5.3□□□□□ -1.56
Msx1P13297 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Msx1P13297 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Msx1P13297 Gm15297-201ENSMUST00000117795 290 ntBASIC5.3□□□□□ -1.56
Msx1P13297 Gm11429-201ENSMUST00000119089 144 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms