Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm13867-201ENSMUST00000120844 395 ntBASIC5.25□□□□□ -1.57
RaraP11416 Gm13932-201ENSMUST00000120873 610 ntBASIC5.25□□□□□ -1.57
RaraP11416 Gm13132-201ENSMUST00000121194 472 ntBASIC5.25□□□□□ -1.57
RaraP11416 Gm11430-201ENSMUST00000121317 217 ntBASIC5.25□□□□□ -1.57
RaraP11416 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC5.25□□□□□ -1.57
RaraP11416 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC5.25□□□□□ -1.57
RaraP11416 Gm24584-201ENSMUST00000157972 107 ntBASIC5.25□□□□□ -1.57
RaraP11416 Gm25603-201ENSMUST00000158361 105 ntBASIC5.25□□□□□ -1.57
RaraP11416 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RaraP11416 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RaraP11416 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
RaraP11416 Gm22852-201ENSMUST00000177899 101 ntBASIC5.25□□□□□ -1.57
RaraP11416 Gm7958-201ENSMUST00000178255 468 ntBASIC5.25□□□□□ -1.57
RaraP11416 Gm7950-201ENSMUST00000179633 468 ntBASIC5.25□□□□□ -1.57
RaraP11416 Gm22286-201ENSMUST00000179708 107 ntBASIC5.25□□□□□ -1.57
RaraP11416 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RaraP11416 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.25□□□□□ -1.57
RaraP11416 Gm37881-201ENSMUST00000193001 421 ntBASIC5.25□□□□□ -1.57
RaraP11416 Gm10292-202ENSMUST00000193165 585 ntBASIC5.25□□□□□ -1.57
RaraP11416 Gm44322-201ENSMUST00000196830 115 ntBASIC5.25□□□□□ -1.57
RaraP11416 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RaraP11416 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC5.25□□□□□ -1.57
RaraP11416 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RaraP11416 Gm29884-201ENSMUST00000218403 453 ntBASIC5.25□□□□□ -1.57
RaraP11416 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC5.25□□□□□ -1.57
RaraP11416 AC154583.1-201ENSMUST00000224788 655 ntBASIC5.25□□□□□ -1.57
RaraP11416 AC154515.2-201ENSMUST00000226093 406 ntBASIC5.25□□□□□ -1.57
RaraP11416 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RaraP11416 Gm22749-201ENSMUST00000082490 107 ntBASIC5.25□□□□□ -1.57
RaraP11416 Gm24856-201ENSMUST00000082809 107 ntBASIC5.25□□□□□ -1.57
RaraP11416 Gm25258-201ENSMUST00000083049 107 ntBASIC5.25□□□□□ -1.57
RaraP11416 Gm24045-201ENSMUST00000083113 98 ntBASIC5.25□□□□□ -1.57
RaraP11416 Gm24535-201ENSMUST00000083140 107 ntBASIC5.25□□□□□ -1.57
RaraP11416 n-R5s167-201ENSMUST00000083227 121 ntBASIC5.25□□□□□ -1.57
RaraP11416 Gm25187-201ENSMUST00000083906 133 ntBASIC5.25□□□□□ -1.57
RaraP11416 Gm22352-201ENSMUST00000083917 107 ntBASIC5.25□□□□□ -1.57
RaraP11416 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
RaraP11416 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RaraP11416 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.25□□□□□ -1.57
RaraP11416 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.25□□□□□ -1.57
RaraP11416 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RaraP11416 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
RaraP11416 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RaraP11416 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RaraP11416 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RaraP11416 Gm5362-201ENSMUST00000211968 3085 ntBASIC5.25□□□□□ -1.57
RaraP11416 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
RaraP11416 Gm43374-201ENSMUST00000202498 2391 ntBASIC5.24□□□□□ -1.57
RaraP11416 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
RaraP11416 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RaraP11416 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RaraP11416 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
RaraP11416 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
RaraP11416 AC133076.2-201ENSMUST00000227678 3532 ntBASIC5.24□□□□□ -1.57
RaraP11416 Mir743b-201ENSMUST00000104751 77 ntBASIC5.24□□□□□ -1.57
RaraP11416 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.24□□□□□ -1.57
RaraP11416 Gm22725-201ENSMUST00000158092 110 ntBASIC5.24□□□□□ -1.57
RaraP11416 Gm22435-201ENSMUST00000158552 128 ntBASIC5.24□□□□□ -1.57
RaraP11416 Gm10319-202ENSMUST00000159439 846 ntBASIC5.24□□□□□ -1.57
RaraP11416 Mir6393-201ENSMUST00000183709 94 ntBASIC5.24□□□□□ -1.57
RaraP11416 Gm27410-201ENSMUST00000183851 115 ntBASIC5.24□□□□□ -1.57
RaraP11416 Gm5368-201ENSMUST00000189012 589 ntBASIC5.24□□□□□ -1.57
RaraP11416 Gm28467-201ENSMUST00000190981 318 ntBASIC5.24□□□□□ -1.57
RaraP11416 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RaraP11416 Gm38053-201ENSMUST00000193938 160 ntBASIC5.24□□□□□ -1.57
RaraP11416 Gm18036-201ENSMUST00000195256 272 ntBASIC5.24□□□□□ -1.57
RaraP11416 Gm7871-201ENSMUST00000195346 618 ntBASIC5.24□□□□□ -1.57
RaraP11416 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RaraP11416 Gm33601-201ENSMUST00000210001 961 ntBASIC5.24□□□□□ -1.57
RaraP11416 Gm45434-201ENSMUST00000210550 293 ntBASIC5.24□□□□□ -1.57
RaraP11416 AC160863.1-201ENSMUST00000218412 317 ntBASIC5.24□□□□□ -1.57
RaraP11416 AC130222.1-201ENSMUST00000221198 256 ntBASIC5.24□□□□□ -1.57
RaraP11416 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC5.24□□□□□ -1.57
RaraP11416 Gm23055-201ENSMUST00000082805 94 ntBASIC5.24□□□□□ -1.57
RaraP11416 Gm24525-201ENSMUST00000082917 151 ntBASIC5.24□□□□□ -1.57
RaraP11416 Gm37115-201ENSMUST00000193750 2849 ntBASIC5.24□□□□□ -1.57
RaraP11416 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RaraP11416 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RaraP11416 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC5.24□□□□□ -1.57
RaraP11416 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RaraP11416 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
RaraP11416 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
RaraP11416 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
RaraP11416 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RaraP11416 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
RaraP11416 AC149588.1-201ENSMUST00000228274 3745 ntBASIC5.23□□□□□ -1.57
RaraP11416 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
RaraP11416 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RaraP11416 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
RaraP11416 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RaraP11416 Mir599-201ENSMUST00000102378 88 ntBASIC5.23□□□□□ -1.57
RaraP11416 Gm25537-201ENSMUST00000103851 109 ntBASIC5.23□□□□□ -1.57
RaraP11416 Gm15526-201ENSMUST00000112504 204 ntBASIC5.23□□□□□ -1.57
RaraP11416 Gm13664-201ENSMUST00000117304 345 ntBASIC5.23□□□□□ -1.57
RaraP11416 Gm13550-201ENSMUST00000118185 525 ntBASIC5.23□□□□□ -1.57
RaraP11416 Gm12156-201ENSMUST00000119188 554 ntBASIC5.23□□□□□ -1.57
RaraP11416 Gm14792-201ENSMUST00000119725 258 ntBASIC5.23□□□□□ -1.57
RaraP11416 Gm14926-201ENSMUST00000120650 508 ntBASIC5.23□□□□□ -1.57
RaraP11416 Gm12650-201ENSMUST00000121966 258 ntBASIC5.23□□□□□ -1.57
RaraP11416 Gm12785-201ENSMUST00000122052 172 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms