Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC4.41□□□□□ -1.7
Hoxd3P09027 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Hoxd3P09027 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Hoxd3P09027 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Hoxd3P09027 Gm17976-201ENSMUST00000184037 1909 ntBASIC4.4□□□□□ -1.7
Hoxd3P09027 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
Hoxd3P09027 Gm13919-202ENSMUST00000140238 1552 ntTSL 5 BASIC4.4□□□□□ -1.7
Hoxd3P09027 Gm42436-201ENSMUST00000198804 3656 ntBASIC4.4□□□□□ -1.7
Hoxd3P09027 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Hoxd3P09027 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Hoxd3P09027 Gm23472-201ENSMUST00000101806 191 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm22592-201ENSMUST00000104242 131 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm24987-201ENSMUST00000104453 134 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm14220-201ENSMUST00000118114 449 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm12640-201ENSMUST00000120097 310 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm13557-201ENSMUST00000120771 382 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC4.4□□□□□ -1.71
Hoxd3P09027 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm25054-201ENSMUST00000157370 97 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm16490-201ENSMUST00000165299 351 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm24497-201ENSMUST00000177868 191 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Mir6540-201ENSMUST00000184886 108 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm28943-201ENSMUST00000186187 615 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm28736-201ENSMUST00000186257 615 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm29401-201ENSMUST00000186690 615 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm29178-204ENSMUST00000186784 615 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm28589-201ENSMUST00000186991 615 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm28936-201ENSMUST00000187153 615 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm29121-201ENSMUST00000187611 615 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm28243-201ENSMUST00000187801 615 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm28844-202ENSMUST00000187977 615 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm29058-201ENSMUST00000189510 615 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm29624-201ENSMUST00000190018 615 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm28780-201ENSMUST00000190223 615 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm28969-211ENSMUST00000190992 615 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm28990-207ENSMUST00000191219 615 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm36468-201ENSMUST00000192119 615 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm31572-201ENSMUST00000193341 615 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm30175-201ENSMUST00000194173 615 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm37167-201ENSMUST00000194946 396 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm30858-201ENSMUST00000195516 615 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Igkv9-128-201ENSMUST00000196602 353 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm42643-201ENSMUST00000200504 279 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm35648-201ENSMUST00000202304 475 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm44371-201ENSMUST00000204148 467 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC4.4□□□□□ -1.71
Hoxd3P09027 AC124420.1-201ENSMUST00000219779 791 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm7093-201ENSMUST00000223004 581 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 AC154636.1-201ENSMUST00000223226 126 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm25813-201ENSMUST00000082748 191 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm24950-201ENSMUST00000082768 191 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm23444-201ENSMUST00000082922 191 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm23971-201ENSMUST00000083317 191 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Mir7-2-201ENSMUST00000083675 97 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm23849-201ENSMUST00000083833 191 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm26316-201ENSMUST00000083886 191 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Rnu2-10-201ENSMUST00000084010 191 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Hoxd3P09027 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
Hoxd3P09027 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Hoxd3P09027 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Hoxd3P09027 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Hoxd3P09027 Ncoa7-208ENSMUST00000215926 2875 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Hoxd3P09027 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm45426-201ENSMUST00000209393 3672 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm3978-201ENSMUST00000163406 2512 ntBASIC4.4□□□□□ -1.71
Hoxd3P09027 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Hoxd3P09027 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC4.4□□□□□ -1.71
Hoxd3P09027 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Hoxd3P09027 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Hoxd3P09027 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Hoxd3P09027 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC4.39□□□□□ -1.71
Hoxd3P09027 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC4.39□□□□□ -1.71
Hoxd3P09027 Gm42681-201ENSMUST00000197999 1611 ntBASIC4.39□□□□□ -1.71
Hoxd3P09027 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Hoxd3P09027 Gm38362-201ENSMUST00000192999 2064 ntBASIC4.39□□□□□ -1.71
Hoxd3P09027 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC4.39□□□□□ -1.71
Hoxd3P09027 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Hoxd3P09027 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
Hoxd3P09027 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC4.39□□□□□ -1.71
Hoxd3P09027 Gm22499-201ENSMUST00000104501 135 ntBASIC4.39□□□□□ -1.71
Hoxd3P09027 Gm24160-201ENSMUST00000104594 126 ntBASIC4.39□□□□□ -1.71
Hoxd3P09027 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
Hoxd3P09027 Gm12062-201ENSMUST00000117533 259 ntBASIC4.39□□□□□ -1.71
Hoxd3P09027 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC4.39□□□□□ -1.71
Hoxd3P09027 Gm11975-201ENSMUST00000118772 481 ntBASIC4.39□□□□□ -1.71
Hoxd3P09027 Gm8061-201ENSMUST00000122380 350 ntBASIC4.39□□□□□ -1.71
Hoxd3P09027 Gm25103-201ENSMUST00000122671 318 ntBASIC4.39□□□□□ -1.71
Hoxd3P09027 Gm23640-201ENSMUST00000157860 104 ntBASIC4.39□□□□□ -1.71
Hoxd3P09027 Gm24005-201ENSMUST00000158459 296 ntBASIC4.39□□□□□ -1.71
Hoxd3P09027 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 244 ms