Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Vti1bO88384 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Vti1bO88384 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Vti1bO88384 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.59□□□□□ -1.67
Vti1bO88384 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Vti1bO88384 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
Vti1bO88384 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Vti1bO88384 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Vti1bO88384 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC4.59□□□□□ -1.67
Vti1bO88384 Gm14390-201ENSMUST00000117505 1695 ntBASIC4.59□□□□□ -1.67
Vti1bO88384 Gm15357-201ENSMUST00000119160 285 ntBASIC4.59□□□□□ -1.67
Vti1bO88384 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC4.59□□□□□ -1.67
Vti1bO88384 Gm16362-201ENSMUST00000135189 214 ntBASIC4.59□□□□□ -1.67
Vti1bO88384 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC4.59□□□□□ -1.67
Vti1bO88384 Gm23169-201ENSMUST00000157157 112 ntBASIC4.59□□□□□ -1.67
Vti1bO88384 Gm22791-201ENSMUST00000157232 145 ntBASIC4.59□□□□□ -1.67
Vti1bO88384 Gm8338-201ENSMUST00000163928 363 ntBASIC4.59□□□□□ -1.67
Vti1bO88384 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Vti1bO88384 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Vti1bO88384 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC4.59□□□□□ -1.67
Vti1bO88384 Gm26622-201ENSMUST00000180520 298 ntBASIC4.59□□□□□ -1.67
Vti1bO88384 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Vti1bO88384 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC4.59□□□□□ -1.67
Vti1bO88384 Gm28724-201ENSMUST00000186149 625 ntBASIC4.59□□□□□ -1.67
Vti1bO88384 Gm28860-201ENSMUST00000188103 313 ntBASIC4.59□□□□□ -1.67
Vti1bO88384 Gm29229-201ENSMUST00000188874 323 ntBASIC4.59□□□□□ -1.67
Vti1bO88384 Gm29330-201ENSMUST00000190032 699 ntBASIC4.59□□□□□ -1.67
Vti1bO88384 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Vti1bO88384 Gm37313-201ENSMUST00000191673 290 ntBASIC4.59□□□□□ -1.67
Vti1bO88384 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Vti1bO88384 Gm38150-201ENSMUST00000192996 452 ntBASIC4.59□□□□□ -1.67
Vti1bO88384 Gm37743-201ENSMUST00000194645 376 ntBASIC4.59□□□□□ -1.67
Vti1bO88384 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC4.59□□□□□ -1.67
Vti1bO88384 Igkv3-8-201ENSMUST00000197635 339 ntBASIC4.59□□□□□ -1.67
Vti1bO88384 AL645522.1-201ENSMUST00000197692 104 ntBASIC4.59□□□□□ -1.67
Vti1bO88384 Gm44468-201ENSMUST00000199516 105 ntBASIC4.59□□□□□ -1.67
Vti1bO88384 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.59□□□□□ -1.67
Vti1bO88384 Gm7825-201ENSMUST00000204046 416 ntBASIC4.59□□□□□ -1.67
Vti1bO88384 Gm18423-201ENSMUST00000205144 1074 ntBASIC4.59□□□□□ -1.67
Vti1bO88384 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Vti1bO88384 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC4.59□□□□□ -1.67
Vti1bO88384 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Vti1bO88384 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Vti1bO88384 AC153506.2-201ENSMUST00000218051 257 ntBASIC4.59□□□□□ -1.67
Vti1bO88384 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Vti1bO88384 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Vti1bO88384 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC4.59□□□□□ -1.67
Vti1bO88384 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Vti1bO88384 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
Vti1bO88384 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Vti1bO88384 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Vti1bO88384 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Vti1bO88384 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Vti1bO88384 Gm23456-201ENSMUST00000083335 137 ntBASIC4.59□□□□□ -1.67
Vti1bO88384 Gm22577-201ENSMUST00000083731 109 ntBASIC4.59□□□□□ -1.67
Vti1bO88384 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC4.59□□□□□ -1.67
Vti1bO88384 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.59□□□□□ -1.68
Vti1bO88384 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Vti1bO88384 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
Vti1bO88384 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Vti1bO88384 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.68
Vti1bO88384 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Vti1bO88384 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.58□□□□□ -1.68
Vti1bO88384 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Vti1bO88384 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Vti1bO88384 Gm5362-201ENSMUST00000211968 3085 ntBASIC4.58□□□□□ -1.68
Vti1bO88384 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Vti1bO88384 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Vti1bO88384 Gm12112-201ENSMUST00000117772 231 ntBASIC4.58□□□□□ -1.68
Vti1bO88384 Gm13806-201ENSMUST00000117822 325 ntBASIC4.58□□□□□ -1.68
Vti1bO88384 Gm13085-201ENSMUST00000118356 171 ntBASIC4.58□□□□□ -1.68
Vti1bO88384 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.58□□□□□ -1.68
Vti1bO88384 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC4.58□□□□□ -1.68
Vti1bO88384 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC4.58□□□□□ -1.68
Vti1bO88384 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC4.58□□□□□ -1.68
Vti1bO88384 Gm7925-201ENSMUST00000166690 401 ntBASIC4.58□□□□□ -1.68
Vti1bO88384 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC4.58□□□□□ -1.68
Vti1bO88384 Gm26180-201ENSMUST00000179942 107 ntBASIC4.58□□□□□ -1.68
Vti1bO88384 Mir6416-201ENSMUST00000183664 117 ntBASIC4.58□□□□□ -1.68
Vti1bO88384 Gm43238-201ENSMUST00000196463 359 ntBASIC4.58□□□□□ -1.68
Vti1bO88384 Gm43669-201ENSMUST00000198229 436 ntBASIC4.58□□□□□ -1.68
Vti1bO88384 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC4.58□□□□□ -1.68
Vti1bO88384 Gm17989-201ENSMUST00000211543 412 ntBASIC4.58□□□□□ -1.68
Vti1bO88384 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC4.58□□□□□ -1.68
Vti1bO88384 Gm40692-201ENSMUST00000220411 491 ntBASIC4.58□□□□□ -1.68
Vti1bO88384 Gm6049-201ENSMUST00000222369 458 ntBASIC4.58□□□□□ -1.68
Vti1bO88384 Gm9512-201ENSMUST00000223112 497 ntBASIC4.58□□□□□ -1.68
Vti1bO88384 AC161269.1-201ENSMUST00000228426 318 ntBASIC4.58□□□□□ -1.68
Vti1bO88384 AC138765.1-201ENSMUST00000228657 385 ntBASIC4.58□□□□□ -1.68
Vti1bO88384 Gm26446-201ENSMUST00000082455 103 ntBASIC4.58□□□□□ -1.68
Vti1bO88384 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
Vti1bO88384 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
Vti1bO88384 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.58□□□□□ -1.68
Vti1bO88384 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Vti1bO88384 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Vti1bO88384 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.58□□□□□ -1.68
Vti1bO88384 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Vti1bO88384 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.58□□□□□ -1.68
Vti1bO88384 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.58□□□□□ -1.68
Vti1bO88384 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms