Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm29045-201ENSMUST00000187278 698 ntBASIC2.27□□□□□ -2.05
Hmgb3O54879 Gm29370-202ENSMUST00000187476 499 ntBASIC2.27□□□□□ -2.05
Hmgb3O54879 Gm6801-201ENSMUST00000190697 339 ntBASIC2.27□□□□□ -2.05
Hmgb3O54879 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC2.27□□□□□ -2.05
Hmgb3O54879 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC2.27□□□□□ -2.05
Hmgb3O54879 Gm44688-201ENSMUST00000209083 537 ntBASIC2.27□□□□□ -2.05
Hmgb3O54879 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC2.27□□□□□ -2.05
Hmgb3O54879 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Hmgb3O54879 Gm8942-201ENSMUST00000217892 400 ntBASIC2.27□□□□□ -2.05
Hmgb3O54879 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC2.27□□□□□ -2.05
Hmgb3O54879 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.27□□□□□ -2.05
Hmgb3O54879 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Hmgb3O54879 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Hmgb3O54879 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Hmgb3O54879 Gm25147-201ENSMUST00000083030 105 ntBASIC2.27□□□□□ -2.05
Hmgb3O54879 Gm22970-201ENSMUST00000083304 186 ntBASIC2.27□□□□□ -2.05
Hmgb3O54879 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Hmgb3O54879 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Hmgb3O54879 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Hmgb3O54879 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Hmgb3O54879 Gm28359-201ENSMUST00000187470 1322 ntBASIC2.26□□□□□ -2.05
Hmgb3O54879 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Hmgb3O54879 Mir542-201ENSMUST00000102186 85 ntBASIC2.26□□□□□ -2.05
Hmgb3O54879 Gm25466-201ENSMUST00000103995 132 ntBASIC2.26□□□□□ -2.05
Hmgb3O54879 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.26□□□□□ -2.05
Hmgb3O54879 Gm16383-201ENSMUST00000118122 232 ntBASIC2.26□□□□□ -2.05
Hmgb3O54879 Gm12137-201ENSMUST00000119565 346 ntBASIC2.26□□□□□ -2.05
Hmgb3O54879 Gm13973-201ENSMUST00000121371 894 ntBASIC2.26□□□□□ -2.05
Hmgb3O54879 Gm7209-201ENSMUST00000122339 333 ntBASIC2.26□□□□□ -2.05
Hmgb3O54879 Gm8840-201ENSMUST00000122454 386 ntBASIC2.26□□□□□ -2.05
Hmgb3O54879 Gm3160-201ENSMUST00000128343 607 ntBASIC2.26□□□□□ -2.05
Hmgb3O54879 Gm23033-201ENSMUST00000157996 134 ntBASIC2.26□□□□□ -2.05
Hmgb3O54879 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Hmgb3O54879 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.26□□□□□ -2.05
Hmgb3O54879 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC2.26□□□□□ -2.05
Hmgb3O54879 Gm27783-201ENSMUST00000183534 105 ntBASIC2.26□□□□□ -2.05
Hmgb3O54879 Gm27374-201ENSMUST00000183660 81 ntBASIC2.26□□□□□ -2.05
Hmgb3O54879 Gm7142-201ENSMUST00000194232 586 ntBASIC2.26□□□□□ -2.05
Hmgb3O54879 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Hmgb3O54879 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC2.26□□□□□ -2.05
Hmgb3O54879 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC2.26□□□□□ -2.05
Hmgb3O54879 Gm18043-201ENSMUST00000216741 739 ntBASIC2.26□□□□□ -2.05
Hmgb3O54879 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.26□□□□□ -2.05
Hmgb3O54879 AC099578.1-201ENSMUST00000220147 435 ntBASIC2.26□□□□□ -2.05
Hmgb3O54879 AC158392.1-201ENSMUST00000223720 1069 ntBASIC2.26□□□□□ -2.05
Hmgb3O54879 AC154594.1-201ENSMUST00000225171 1273 ntBASIC2.26□□□□□ -2.05
Hmgb3O54879 CT025525.3-201ENSMUST00000228858 366 ntBASIC2.26□□□□□ -2.05
Hmgb3O54879 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Hmgb3O54879 Mir27a-201ENSMUST00000083510 87 ntBASIC2.26□□□□□ -2.05
Hmgb3O54879 Gm23847-201ENSMUST00000083829 110 ntBASIC2.26□□□□□ -2.05
Hmgb3O54879 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Hmgb3O54879 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Hmgb3O54879 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Hmgb3O54879 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
Hmgb3O54879 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Hmgb3O54879 Gm37645-201ENSMUST00000194285 3556 ntBASIC2.25□□□□□ -2.05
Hmgb3O54879 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Hmgb3O54879 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Hmgb3O54879 Gm17976-201ENSMUST00000184037 1909 ntBASIC2.25□□□□□ -2.05
Hmgb3O54879 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
Hmgb3O54879 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Hmgb3O54879 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Hmgb3O54879 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.25□□□□□ -2.05
Hmgb3O54879 Gm24119-201ENSMUST00000103979 246 ntBASIC2.25□□□□□ -2.05
Hmgb3O54879 Gm25526-201ENSMUST00000104332 132 ntBASIC2.25□□□□□ -2.05
Hmgb3O54879 Gm12427-201ENSMUST00000117719 302 ntBASIC2.25□□□□□ -2.05
Hmgb3O54879 Gm14716-201ENSMUST00000120138 718 ntBASIC2.25□□□□□ -2.05
Hmgb3O54879 Gm15190-201ENSMUST00000120855 276 ntBASIC2.25□□□□□ -2.05
Hmgb3O54879 Gm22730-201ENSMUST00000158085 171 ntBASIC2.25□□□□□ -2.05
Hmgb3O54879 Gm21809-201ENSMUST00000178495 468 ntBASIC2.25□□□□□ -2.05
Hmgb3O54879 Gm26297-201ENSMUST00000179464 132 ntBASIC2.25□□□□□ -2.05
Hmgb3O54879 Gm28975-201ENSMUST00000186412 686 ntBASIC2.25□□□□□ -2.05
Hmgb3O54879 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC2.25□□□□□ -2.05
Hmgb3O54879 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Hmgb3O54879 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.25□□□□□ -2.05
Hmgb3O54879 AC093926.1-201ENSMUST00000213730 243 ntBASIC2.25□□□□□ -2.05
Hmgb3O54879 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.25□□□□□ -2.05
Hmgb3O54879 Gm46194-201ENSMUST00000218136 320 ntBASIC2.25□□□□□ -2.05
Hmgb3O54879 Gm4928-201ENSMUST00000219622 850 ntBASIC2.25□□□□□ -2.05
Hmgb3O54879 AC118639.1-204ENSMUST00000226401 694 ntBASIC2.25□□□□□ -2.05
Hmgb3O54879 Gm9845-201ENSMUST00000056409 598 ntBASIC2.25□□□□□ -2.05
Hmgb3O54879 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Hmgb3O54879 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Hmgb3O54879 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Hmgb3O54879 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.25□□□□□ -2.05
Hmgb3O54879 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
Hmgb3O54879 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Hmgb3O54879 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Hmgb3O54879 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC2.24□□□□□ -2.05
Hmgb3O54879 Gm11576-201ENSMUST00000117433 417 ntBASIC2.24□□□□□ -2.05
Hmgb3O54879 Gm11367-201ENSMUST00000117802 120 ntBASIC2.24□□□□□ -2.05
Hmgb3O54879 Gm14627-201ENSMUST00000118931 567 ntBASIC2.24□□□□□ -2.05
Hmgb3O54879 Gm7363-201ENSMUST00000119883 399 ntBASIC2.24□□□□□ -2.05
Hmgb3O54879 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC2.24□□□□□ -2.05
Hmgb3O54879 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC2.24□□□□□ -2.05
Hmgb3O54879 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
Hmgb3O54879 Gm24008-201ENSMUST00000157733 138 ntBASIC2.24□□□□□ -2.05
Hmgb3O54879 Gm22187-201ENSMUST00000157819 129 ntBASIC2.24□□□□□ -2.05
Hmgb3O54879 Gm26088-201ENSMUST00000157896 131 ntBASIC2.24□□□□□ -2.05
Hmgb3O54879 Gm16236-201ENSMUST00000159588 379 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms