Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gm7407-201ENSMUST00000208301 568 ntBASIC4.72□□□□□ -1.65
Trim55G3X8Y1 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Trim55G3X8Y1 AC123618.1-201ENSMUST00000220174 360 ntBASIC4.72□□□□□ -1.65
Trim55G3X8Y1 AC166358.7-201ENSMUST00000221132 108 ntBASIC4.72□□□□□ -1.65
Trim55G3X8Y1 AC125543.5-201ENSMUST00000222799 108 ntBASIC4.72□□□□□ -1.65
Trim55G3X8Y1 AL807824.1-201ENSMUST00000223151 183 ntBASIC4.72□□□□□ -1.65
Trim55G3X8Y1 AC122393.3-201ENSMUST00000226343 1059 ntBASIC4.72□□□□□ -1.65
Trim55G3X8Y1 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trim55G3X8Y1 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Trim55G3X8Y1 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trim55G3X8Y1 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.72□□□□□ -1.65
Trim55G3X8Y1 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Trim55G3X8Y1 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.72□□□□□ -1.65
Trim55G3X8Y1 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Trim55G3X8Y1 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trim55G3X8Y1 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Trim55G3X8Y1 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Trim55G3X8Y1 Gm37970-201ENSMUST00000193865 1732 ntBASIC4.72□□□□□ -1.65
Trim55G3X8Y1 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC4.72□□□□□ -1.65
Trim55G3X8Y1 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Trim55G3X8Y1 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.65
Trim55G3X8Y1 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Mir690-201ENSMUST00000102110 109 ntBASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Gm13007-201ENSMUST00000121866 365 ntBASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Gm24898-201ENSMUST00000158133 106 ntBASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Gm28061-201ENSMUST00000189085 807 ntBASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Gm7858-201ENSMUST00000190177 622 ntBASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Gm29490-201ENSMUST00000190923 342 ntBASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Gm37404-201ENSMUST00000195726 359 ntBASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Gm43238-201ENSMUST00000196463 359 ntBASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Gm44456-201ENSMUST00000196554 89 ntBASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Mir6994-201ENSMUST00000198985 73 ntBASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Gm44330-201ENSMUST00000200106 143 ntBASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Gm7825-201ENSMUST00000204046 416 ntBASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Gm18854-201ENSMUST00000211196 329 ntBASIC4.71□□□□□ -1.66
Trim55G3X8Y1 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Trim55G3X8Y1 AC160016.1-201ENSMUST00000215589 448 ntBASIC4.71□□□□□ -1.66
Trim55G3X8Y1 AC161114.1-201ENSMUST00000218223 474 ntBASIC4.71□□□□□ -1.66
Trim55G3X8Y1 CT571268.1-201ENSMUST00000222320 407 ntBASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Trim55G3X8Y1 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trim55G3X8Y1 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Trim55G3X8Y1 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Gm24374-201ENSMUST00000104394 106 ntBASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Gm8880-201ENSMUST00000121800 454 ntBASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Gm22945-201ENSMUST00000158557 157 ntBASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Mir3062-201ENSMUST00000174986 105 ntBASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Gm23799-201ENSMUST00000175559 120 ntBASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Snord116l14-201ENSMUST00000179875 94 ntBASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Gm23523-201ENSMUST00000180190 107 ntBASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Gm27640-201ENSMUST00000184580 147 ntBASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Gm10105-201ENSMUST00000184601 270 ntBASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Gm5368-201ENSMUST00000189012 589 ntBASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Gm28924-201ENSMUST00000190012 241 ntBASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Gm37743-201ENSMUST00000194645 376 ntBASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Gm38019-201ENSMUST00000195133 380 ntBASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Ighv1-35-201ENSMUST00000195265 351 ntBASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Gm43406-201ENSMUST00000200356 334 ntBASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Gm44184-201ENSMUST00000204290 132 ntBASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC4.7□□□□□ -1.66
Trim55G3X8Y1 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Trim55G3X8Y1 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms