Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
H2afb3S4R1G7 AC134596.1-201ENSMUST00000222016 1922 ntBASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Gm23608-201ENSMUST00000104545 128 ntBASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Gm13868-201ENSMUST00000122411 294 ntBASIC3.82□□□□□ -1.8
H2afb3S4R1G7 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Gm12226-201ENSMUST00000144172 876 ntBASIC3.82□□□□□ -1.8
H2afb3S4R1G7 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Gm22491-201ENSMUST00000157190 102 ntBASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Gm27896-201ENSMUST00000175162 317 ntBASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Gm22355-201ENSMUST00000175531 96 ntBASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Gm26335-201ENSMUST00000178449 107 ntBASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Gm26092-201ENSMUST00000179798 97 ntBASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Mir669a-1-201ENSMUST00000180238 97 ntBASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Gm26556-201ENSMUST00000180645 320 ntBASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Gm4842-201ENSMUST00000183237 835 ntBASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Mir6382-201ENSMUST00000184055 110 ntBASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Gm27332-201ENSMUST00000184893 112 ntBASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Gm28283-201ENSMUST00000185509 178 ntBASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Gm29045-201ENSMUST00000187278 698 ntBASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Gm21856-201ENSMUST00000187547 696 ntBASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Gm36964-201ENSMUST00000191876 198 ntBASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Gm42758-201ENSMUST00000202146 283 ntBASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Gm44142-201ENSMUST00000203358 311 ntBASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Gm6112-201ENSMUST00000208037 629 ntBASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Gm18850-201ENSMUST00000211578 388 ntBASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.82□□□□□ -1.8
H2afb3S4R1G7 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
H2afb3S4R1G7 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
H2afb3S4R1G7 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
H2afb3S4R1G7 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
H2afb3S4R1G7 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.81□□□□□ -1.8
H2afb3S4R1G7 Gm23014-201ENSMUST00000104144 130 ntBASIC3.81□□□□□ -1.8
H2afb3S4R1G7 Gm14558-201ENSMUST00000117458 381 ntBASIC3.81□□□□□ -1.8
H2afb3S4R1G7 Gm11366-201ENSMUST00000119279 429 ntBASIC3.81□□□□□ -1.8
H2afb3S4R1G7 Gm8200-201ENSMUST00000122390 222 ntBASIC3.81□□□□□ -1.8
H2afb3S4R1G7 Gm22156-201ENSMUST00000158409 141 ntBASIC3.81□□□□□ -1.8
H2afb3S4R1G7 Gm23702-201ENSMUST00000158840 130 ntBASIC3.81□□□□□ -1.8
H2afb3S4R1G7 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC3.81□□□□□ -1.8
H2afb3S4R1G7 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
H2afb3S4R1G7 Gm20794-201ENSMUST00000177626 628 ntBASIC3.81□□□□□ -1.8
H2afb3S4R1G7 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC3.81□□□□□ -1.8
H2afb3S4R1G7 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC3.81□□□□□ -1.8
H2afb3S4R1G7 Gm24306-201ENSMUST00000180229 79 ntBASIC3.81□□□□□ -1.8
H2afb3S4R1G7 Gm27660-201ENSMUST00000184028 208 ntBASIC3.81□□□□□ -1.8
H2afb3S4R1G7 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC3.81□□□□□ -1.8
H2afb3S4R1G7 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
H2afb3S4R1G7 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
H2afb3S4R1G7 Gm38075-201ENSMUST00000191979 920 ntBASIC3.81□□□□□ -1.8
H2afb3S4R1G7 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC3.81□□□□□ -1.8
H2afb3S4R1G7 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC3.81□□□□□ -1.8
H2afb3S4R1G7 Gm19649-201ENSMUST00000201126 822 ntBASIC3.81□□□□□ -1.8
H2afb3S4R1G7 Gm45031-201ENSMUST00000206800 288 ntBASIC3.81□□□□□ -1.8
H2afb3S4R1G7 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
H2afb3S4R1G7 Gm5358-201ENSMUST00000212814 353 ntBASIC3.81□□□□□ -1.8
H2afb3S4R1G7 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.81□□□□□ -1.8
H2afb3S4R1G7 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC3.81□□□□□ -1.8
H2afb3S4R1G7 AC159621.1-201ENSMUST00000223249 163 ntBASIC3.81□□□□□ -1.8
H2afb3S4R1G7 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC3.81□□□□□ -1.8
H2afb3S4R1G7 AC117202.2-201ENSMUST00000226491 1101 ntBASIC3.81□□□□□ -1.8
H2afb3S4R1G7 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
H2afb3S4R1G7 n-R5s94-201ENSMUST00000082573 119 ntBASIC3.81□□□□□ -1.8
H2afb3S4R1G7 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
H2afb3S4R1G7 Gm37899-201ENSMUST00000193116 8717 ntBASIC3.81□□□□□ -1.8
H2afb3S4R1G7 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
H2afb3S4R1G7 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.81□□□□□ -1.8
H2afb3S4R1G7 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
H2afb3S4R1G7 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
H2afb3S4R1G7 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
H2afb3S4R1G7 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
H2afb3S4R1G7 Gm42991-201ENSMUST00000196468 3837 ntBASIC3.8□□□□□ -1.8
H2afb3S4R1G7 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
H2afb3S4R1G7 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
H2afb3S4R1G7 Gm43327-201ENSMUST00000199285 4055 ntBASIC3.8□□□□□ -1.8
H2afb3S4R1G7 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
H2afb3S4R1G7 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
H2afb3S4R1G7 Mir92b-201ENSMUST00000102300 83 ntBASIC3.8□□□□□ -1.8
H2afb3S4R1G7 Gm11386-201ENSMUST00000117761 347 ntBASIC3.8□□□□□ -1.8
H2afb3S4R1G7 Gm11408-201ENSMUST00000117889 519 ntBASIC3.8□□□□□ -1.8
H2afb3S4R1G7 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC3.8□□□□□ -1.8
H2afb3S4R1G7 Gm14240-201ENSMUST00000120353 546 ntBASIC3.8□□□□□ -1.8
H2afb3S4R1G7 Gm14428-201ENSMUST00000120408 822 ntBASIC3.8□□□□□ -1.8
H2afb3S4R1G7 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC3.8□□□□□ -1.8
H2afb3S4R1G7 Gm13745-201ENSMUST00000121994 527 ntBASIC3.8□□□□□ -1.8
H2afb3S4R1G7 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms