Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm17054-201ENSMUST00000169811 259 ntBASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm20693-201ENSMUST00000177431 211 ntBASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm29073-201ENSMUST00000185563 664 ntBASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm29299-201ENSMUST00000185609 923 ntBASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm17929-201ENSMUST00000186851 627 ntBASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm29573-201ENSMUST00000190291 919 ntBASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm29165-201ENSMUST00000190655 664 ntBASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm29211-201ENSMUST00000191470 664 ntBASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm37575-201ENSMUST00000195467 309 ntBASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm43239-201ENSMUST00000200131 201 ntBASIC3.29□□□□□ -1.88
H2afb1S4R1E0 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm45312-201ENSMUST00000210566 311 ntBASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm45742-201ENSMUST00000212400 433 ntBASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm18225-201ENSMUST00000216708 742 ntBASIC3.29□□□□□ -1.88
H2afb1S4R1E0 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.29□□□□□ -1.88
H2afb1S4R1E0 CT025525.2-201ENSMUST00000227743 423 ntBASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.29□□□□□ -1.88
H2afb1S4R1E0 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
H2afb1S4R1E0 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.28□□□□□ -1.88
H2afb1S4R1E0 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
H2afb1S4R1E0 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
H2afb1S4R1E0 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC3.28□□□□□ -1.88
H2afb1S4R1E0 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.28□□□□□ -1.88
H2afb1S4R1E0 Gm15195-201ENSMUST00000118775 263 ntBASIC3.28□□□□□ -1.88
H2afb1S4R1E0 Gm14901-201ENSMUST00000119001 283 ntBASIC3.28□□□□□ -1.88
H2afb1S4R1E0 Gm15263-201ENSMUST00000121556 642 ntBASIC3.28□□□□□ -1.88
H2afb1S4R1E0 Gm24059-201ENSMUST00000157493 312 ntBASIC3.28□□□□□ -1.88
H2afb1S4R1E0 Gm22307-201ENSMUST00000180019 107 ntBASIC3.28□□□□□ -1.88
H2afb1S4R1E0 Gm26746-201ENSMUST00000181722 487 ntBASIC3.28□□□□□ -1.88
H2afb1S4R1E0 Gm10292-201ENSMUST00000183142 581 ntBASIC3.28□□□□□ -1.88
H2afb1S4R1E0 Gm27676-201ENSMUST00000183669 61 ntBASIC3.28□□□□□ -1.88
H2afb1S4R1E0 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
H2afb1S4R1E0 Mir6414-201ENSMUST00000183685 82 ntBASIC3.28□□□□□ -1.88
H2afb1S4R1E0 Gm7870-201ENSMUST00000184467 616 ntBASIC3.28□□□□□ -1.88
H2afb1S4R1E0 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.28□□□□□ -1.88
H2afb1S4R1E0 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC3.28□□□□□ -1.88
H2afb1S4R1E0 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
H2afb1S4R1E0 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.28□□□□□ -1.88
H2afb1S4R1E0 Gm44990-201ENSMUST00000203922 217 ntBASIC3.28□□□□□ -1.88
H2afb1S4R1E0 Gm44475-201ENSMUST00000204041 424 ntBASIC3.28□□□□□ -1.88
H2afb1S4R1E0 Gm45209-201ENSMUST00000207122 353 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms