Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm12685-201ENSMUST00000121702 214 ntBASIC5.31□□□□□ -1.56
Nubp1Q9R060 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.31□□□□□ -1.56
Nubp1Q9R060 Gm25824-201ENSMUST00000157092 121 ntBASIC5.31□□□□□ -1.56
Nubp1Q9R060 Gm22315-201ENSMUST00000158010 143 ntBASIC5.31□□□□□ -1.56
Nubp1Q9R060 Gm17186-201ENSMUST00000171742 456 ntBASIC5.31□□□□□ -1.56
Nubp1Q9R060 Gm23806-201ENSMUST00000175157 109 ntBASIC5.31□□□□□ -1.56
Nubp1Q9R060 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Nubp1Q9R060 Gm27285-201ENSMUST00000183875 127 ntBASIC5.31□□□□□ -1.56
Nubp1Q9R060 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Nubp1Q9R060 Mir219c-201ENSMUST00000199860 60 ntBASIC5.31□□□□□ -1.56
Nubp1Q9R060 Gm43554-201ENSMUST00000199987 186 ntBASIC5.31□□□□□ -1.56
Nubp1Q9R060 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC5.31□□□□□ -1.56
Nubp1Q9R060 Gm7065-201ENSMUST00000222150 474 ntBASIC5.31□□□□□ -1.56
Nubp1Q9R060 AC133598.4-202ENSMUST00000225267 469 ntBASIC5.31□□□□□ -1.56
Nubp1Q9R060 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Nubp1Q9R060 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nubp1Q9R060 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nubp1Q9R060 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nubp1Q9R060 AC159006.2-201ENSMUST00000228734 4144 ntBASIC5.31□□□□□ -1.56
Nubp1Q9R060 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nubp1Q9R060 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nubp1Q9R060 AC122840.2-201ENSMUST00000221030 2659 ntBASIC5.3□□□□□ -1.56
Nubp1Q9R060 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
Nubp1Q9R060 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC5.3□□□□□ -1.56
Nubp1Q9R060 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nubp1Q9R060 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nubp1Q9R060 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Nubp1Q9R060 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Nubp1Q9R060 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Nubp1Q9R060 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Nubp1Q9R060 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Nubp1Q9R060 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Nubp1Q9R060 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nubp1Q9R060 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Nubp1Q9R060 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Nubp1Q9R060 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC5.3□□□□□ -1.56
Nubp1Q9R060 Mup-ps19-201ENSMUST00000120390 519 ntBASIC5.3□□□□□ -1.56
Nubp1Q9R060 Gm26026-201ENSMUST00000122726 123 ntBASIC5.3□□□□□ -1.56
Nubp1Q9R060 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC5.3□□□□□ -1.56
Nubp1Q9R060 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC5.3□□□□□ -1.56
Nubp1Q9R060 Gm25967-201ENSMUST00000157168 147 ntBASIC5.3□□□□□ -1.56
Nubp1Q9R060 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC5.3□□□□□ -1.56
Nubp1Q9R060 Gm7335-201ENSMUST00000172475 373 ntBASIC5.3□□□□□ -1.56
Nubp1Q9R060 Gm21827-201ENSMUST00000178247 423 ntBASIC5.3□□□□□ -1.56
Nubp1Q9R060 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC5.3□□□□□ -1.56
Nubp1Q9R060 Gm27477-201ENSMUST00000184649 143 ntBASIC5.3□□□□□ -1.56
Nubp1Q9R060 Gm28640-201ENSMUST00000190918 550 ntBASIC5.3□□□□□ -1.56
Nubp1Q9R060 Gm37636-201ENSMUST00000193583 359 ntBASIC5.3□□□□□ -1.56
Nubp1Q9R060 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC5.3□□□□□ -1.56
Nubp1Q9R060 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Nubp1Q9R060 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC5.3□□□□□ -1.56
Nubp1Q9R060 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC5.3□□□□□ -1.56
Nubp1Q9R060 Gm45777-201ENSMUST00000213009 301 ntBASIC5.3□□□□□ -1.56
Nubp1Q9R060 AC188459.1-201ENSMUST00000216651 300 ntBASIC5.3□□□□□ -1.56
Nubp1Q9R060 Gm9237-201ENSMUST00000221499 548 ntBASIC5.3□□□□□ -1.56
Nubp1Q9R060 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.3□□□□□ -1.56
Nubp1Q9R060 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nubp1Q9R060 Mir188-201ENSMUST00000083464 68 ntBASIC5.3□□□□□ -1.56
Nubp1Q9R060 Mir143-201ENSMUST00000083511 63 ntBASIC5.3□□□□□ -1.56
Nubp1Q9R060 Gm23502-201ENSMUST00000083902 145 ntBASIC5.3□□□□□ -1.56
Nubp1Q9R060 Gm25257-201ENSMUST00000083907 110 ntBASIC5.3□□□□□ -1.56
Nubp1Q9R060 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Nubp1Q9R060 Gm43188-201ENSMUST00000200180 2160 ntBASIC5.3□□□□□ -1.56
Nubp1Q9R060 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Nubp1Q9R060 AC135119.1-201ENSMUST00000227935 3717 ntBASIC5.3□□□□□ -1.56
Nubp1Q9R060 Olfr591-202ENSMUST00000216581 4802 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Nubp1Q9R060 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC5.3□□□□□ -1.56
Nubp1Q9R060 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nubp1Q9R060 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.3□□□□□ -1.56
Nubp1Q9R060 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Nubp1Q9R060 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Nubp1Q9R060 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nubp1Q9R060 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Nubp1Q9R060 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Nubp1Q9R060 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nubp1Q9R060 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Nubp1Q9R060 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Nubp1Q9R060 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.3□□□□□ -1.56
Nubp1Q9R060 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Nubp1Q9R060 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Nubp1Q9R060 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Nubp1Q9R060 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Nubp1Q9R060 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Nubp1Q9R060 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC5.29□□□□□ -1.56
Nubp1Q9R060 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Nubp1Q9R060 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Nubp1Q9R060 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Nubp1Q9R060 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.29□□□□□ -1.56
Nubp1Q9R060 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Nubp1Q9R060 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Nubp1Q9R060 Mir92b-201ENSMUST00000102300 83 ntBASIC5.29□□□□□ -1.56
Nubp1Q9R060 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Nubp1Q9R060 Gm15377-201ENSMUST00000119594 246 ntBASIC5.29□□□□□ -1.56
Nubp1Q9R060 Gm25914-201ENSMUST00000157618 153 ntBASIC5.29□□□□□ -1.56
Nubp1Q9R060 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Nubp1Q9R060 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Nubp1Q9R060 Gm27355-201ENSMUST00000185045 128 ntBASIC5.29□□□□□ -1.56
Nubp1Q9R060 Gm38015-201ENSMUST00000193048 188 ntBASIC5.29□□□□□ -1.56
Nubp1Q9R060 Gm10048-201ENSMUST00000194196 372 ntBASIC5.29□□□□□ -1.56
Nubp1Q9R060 Gm30341-201ENSMUST00000194363 289 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms