Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm26277-201ENSMUST00000157097 152 ntBASIC2.97□□□□□ -1.93
Trem1Q9JKE2 Gm22390-201ENSMUST00000157588 325 ntBASIC2.97□□□□□ -1.93
Trem1Q9JKE2 Gm22416-201ENSMUST00000158590 88 ntBASIC2.97□□□□□ -1.93
Trem1Q9JKE2 Gm25119-201ENSMUST00000158815 88 ntBASIC2.97□□□□□ -1.93
Trem1Q9JKE2 Gm22531-201ENSMUST00000158819 140 ntBASIC2.97□□□□□ -1.93
Trem1Q9JKE2 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Trem1Q9JKE2 Gm27796-201ENSMUST00000183863 261 ntBASIC2.97□□□□□ -1.93
Trem1Q9JKE2 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC2.97□□□□□ -1.93
Trem1Q9JKE2 Gm9696-202ENSMUST00000191541 830 ntBASIC2.97□□□□□ -1.93
Trem1Q9JKE2 Gm42453-201ENSMUST00000200477 409 ntBASIC2.97□□□□□ -1.93
Trem1Q9JKE2 Gm43228-201ENSMUST00000200735 264 ntBASIC2.97□□□□□ -1.93
Trem1Q9JKE2 Gm18410-201ENSMUST00000207199 577 ntBASIC2.97□□□□□ -1.93
Trem1Q9JKE2 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Trem1Q9JKE2 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Trem1Q9JKE2 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Trem1Q9JKE2 Gm7099-201ENSMUST00000080066 554 ntBASIC2.97□□□□□ -1.93
Trem1Q9JKE2 Mir133a-2-201ENSMUST00000083526 104 ntBASIC2.97□□□□□ -1.93
Trem1Q9JKE2 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Trem1Q9JKE2 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
Trem1Q9JKE2 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC2.97□□□□□ -1.93
Trem1Q9JKE2 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Trem1Q9JKE2 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Gm14404-201ENSMUST00000119117 1660 ntBASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Gm15176-201ENSMUST00000117734 135 ntBASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Defa-ps1-201ENSMUST00000119062 282 ntBASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Gm13541-201ENSMUST00000119519 283 ntBASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Gm12994-201ENSMUST00000119601 447 ntBASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Gm12640-201ENSMUST00000120097 310 ntBASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Gm14463-201ENSMUST00000121117 498 ntBASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Defa-ps6-201ENSMUST00000122172 282 ntBASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Gm22853-201ENSMUST00000174974 131 ntBASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Gm8649-201ENSMUST00000181799 233 ntBASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Gm18551-201ENSMUST00000195594 642 ntBASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Gm44476-201ENSMUST00000196225 91 ntBASIC2.96□□□□□ -1.94
Trem1Q9JKE2 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Trem1Q9JKE2 AC174780.1-201ENSMUST00000199415 1107 ntBASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Gm43604-201ENSMUST00000199799 705 ntBASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Gm42976-201ENSMUST00000200313 222 ntBASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.96□□□□□ -1.94
Trem1Q9JKE2 CT571256.1-201ENSMUST00000226045 585 ntBASIC2.96□□□□□ -1.94
Trem1Q9JKE2 AC140451.2-202ENSMUST00000226156 574 ntBASIC2.96□□□□□ -1.94
Trem1Q9JKE2 AC122448.1-201ENSMUST00000226317 772 ntBASIC2.96□□□□□ -1.94
Trem1Q9JKE2 AC157572.3-201ENSMUST00000227288 303 ntBASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Trem1Q9JKE2 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Trem1Q9JKE2 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Trem1Q9JKE2 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Trem1Q9JKE2 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.95□□□□□ -1.94
Trem1Q9JKE2 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Trem1Q9JKE2 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Trem1Q9JKE2 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Trem1Q9JKE2 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Trem1Q9JKE2 Gm16431-201ENSMUST00000117454 431 ntBASIC2.95□□□□□ -1.94
Trem1Q9JKE2 Gm2288-201ENSMUST00000118560 638 ntBASIC2.95□□□□□ -1.94
Trem1Q9JKE2 Gm11869-201ENSMUST00000118701 329 ntBASIC2.95□□□□□ -1.94
Trem1Q9JKE2 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC2.95□□□□□ -1.94
Trem1Q9JKE2 Gm16060-201ENSMUST00000153140 478 ntBASIC2.95□□□□□ -1.94
Trem1Q9JKE2 Gm26312-201ENSMUST00000157769 165 ntBASIC2.95□□□□□ -1.94
Trem1Q9JKE2 Gm22961-201ENSMUST00000157964 106 ntBASIC2.95□□□□□ -1.94
Trem1Q9JKE2 Gm16290-201ENSMUST00000161175 474 ntBASIC2.95□□□□□ -1.94
Trem1Q9JKE2 Gm16289-201ENSMUST00000162079 183 ntBASIC2.95□□□□□ -1.94
Trem1Q9JKE2 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC2.95□□□□□ -1.94
Trem1Q9JKE2 Gm27903-201ENSMUST00000175482 126 ntBASIC2.95□□□□□ -1.94
Trem1Q9JKE2 Gm27161-201ENSMUST00000183960 562 ntBASIC2.95□□□□□ -1.94
Trem1Q9JKE2 Gm38201-201ENSMUST00000192143 387 ntBASIC2.95□□□□□ -1.94
Trem1Q9JKE2 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC2.95□□□□□ -1.94
Trem1Q9JKE2 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Trem1Q9JKE2 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC2.95□□□□□ -1.94
Trem1Q9JKE2 Platr25-208ENSMUST00000222602 939 ntBASIC2.95□□□□□ -1.94
Trem1Q9JKE2 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.95□□□□□ -1.94
Trem1Q9JKE2 AC158981.3-201ENSMUST00000226844 1024 ntBASIC2.95□□□□□ -1.94
Trem1Q9JKE2 AC158395.1-201ENSMUST00000227206 452 ntBASIC2.95□□□□□ -1.94
Trem1Q9JKE2 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.95□□□□□ -1.94
Trem1Q9JKE2 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Trem1Q9JKE2 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC2.95□□□□□ -1.94
Trem1Q9JKE2 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Trem1Q9JKE2 Gm44800-201ENSMUST00000207510 1855 ntBASIC2.94□□□□□ -1.94
Trem1Q9JKE2 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.94□□□□□ -1.94
Trem1Q9JKE2 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Trem1Q9JKE2 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Trem1Q9JKE2 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC2.94□□□□□ -1.94
Trem1Q9JKE2 Gm13087-201ENSMUST00000118298 256 ntBASIC2.94□□□□□ -1.94
Trem1Q9JKE2 Gm14069-201ENSMUST00000120815 229 ntBASIC2.94□□□□□ -1.94
Trem1Q9JKE2 Gm7209-201ENSMUST00000122339 333 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms