Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC4.18□□□□□ -1.74
Trim54Q9ERP3 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Trim54Q9ERP3 Gm5755-201ENSMUST00000152394 837 ntBASIC4.18□□□□□ -1.74
Trim54Q9ERP3 Gm22555-201ENSMUST00000157801 62 ntBASIC4.18□□□□□ -1.74
Trim54Q9ERP3 Gm23022-201ENSMUST00000158768 180 ntBASIC4.18□□□□□ -1.74
Trim54Q9ERP3 Gm26005-201ENSMUST00000158802 134 ntBASIC4.18□□□□□ -1.74
Trim54Q9ERP3 Gm26177-201ENSMUST00000178683 107 ntBASIC4.18□□□□□ -1.74
Trim54Q9ERP3 Gm24520-201ENSMUST00000179510 110 ntBASIC4.18□□□□□ -1.74
Trim54Q9ERP3 Gm28666-201ENSMUST00000186649 274 ntBASIC4.18□□□□□ -1.74
Trim54Q9ERP3 Gm5368-201ENSMUST00000189012 589 ntBASIC4.18□□□□□ -1.74
Trim54Q9ERP3 Gm18775-201ENSMUST00000190763 586 ntBASIC4.18□□□□□ -1.74
Trim54Q9ERP3 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC4.18□□□□□ -1.74
Trim54Q9ERP3 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC4.18□□□□□ -1.74
Trim54Q9ERP3 Gm42465-201ENSMUST00000197036 492 ntBASIC4.18□□□□□ -1.74
Trim54Q9ERP3 Gm44349-201ENSMUST00000197048 123 ntBASIC4.18□□□□□ -1.74
Trim54Q9ERP3 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC4.18□□□□□ -1.74
Trim54Q9ERP3 Gm7041-201ENSMUST00000201227 524 ntBASIC4.18□□□□□ -1.74
Trim54Q9ERP3 Gm44125-201ENSMUST00000203068 448 ntBASIC4.18□□□□□ -1.74
Trim54Q9ERP3 AC154532.2-201ENSMUST00000228947 598 ntBASIC4.18□□□□□ -1.74
Trim54Q9ERP3 Gm23736-201ENSMUST00000082553 75 ntBASIC4.18□□□□□ -1.74
Trim54Q9ERP3 Snora7a-201ENSMUST00000082629 140 ntBASIC4.18□□□□□ -1.74
Trim54Q9ERP3 Mir30e-201ENSMUST00000083475 92 ntBASIC4.18□□□□□ -1.74
Trim54Q9ERP3 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Trim54Q9ERP3 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Trim54Q9ERP3 Gm44435-201ENSMUST00000204379 4119 ntBASIC4.18□□□□□ -1.74
Trim54Q9ERP3 AC159193.2-201ENSMUST00000220865 4251 ntBASIC4.18□□□□□ -1.74
Trim54Q9ERP3 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Trim54Q9ERP3 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
Trim54Q9ERP3 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Trim54Q9ERP3 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Trim54Q9ERP3 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Gm14421-201ENSMUST00000121755 1958 ntBASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Gm26273-201ENSMUST00000104180 131 ntBASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Gm15613-201ENSMUST00000118396 326 ntBASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Gm6565-201ENSMUST00000121217 438 ntBASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Gm22793-201ENSMUST00000157227 330 ntBASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Gm5709-201ENSMUST00000177879 1165 ntBASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC4.17□□□□□ -1.74
Trim54Q9ERP3 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Gm29365-201ENSMUST00000189461 699 ntBASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Gm37727-201ENSMUST00000191637 819 ntBASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Gm43954-201ENSMUST00000204634 544 ntBASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Gm45192-201ENSMUST00000206749 283 ntBASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC4.17□□□□□ -1.74
Trim54Q9ERP3 AC157570.3-201ENSMUST00000219281 205 ntBASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Gm31849-201ENSMUST00000220306 375 ntBASIC4.17□□□□□ -1.74
Trim54Q9ERP3 AC119573.1-201ENSMUST00000227960 757 ntBASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Gm6361-201ENSMUST00000091031 435 ntBASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Trim54Q9ERP3 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.17□□□□□ -1.74
Trim54Q9ERP3 Gm36927-201ENSMUST00000192504 1841 ntBASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Gm25876-201ENSMUST00000104329 119 ntBASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Gm11352-201ENSMUST00000119264 517 ntBASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Gm11600-201ENSMUST00000119592 240 ntBASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Gm11357-201ENSMUST00000119758 954 ntBASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Gm24836-201ENSMUST00000122609 108 ntBASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Gm2020-201ENSMUST00000145242 579 ntBASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Gm22320-201ENSMUST00000157149 312 ntBASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Gm25667-201ENSMUST00000157701 275 ntBASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Gm24190-201ENSMUST00000157976 216 ntBASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Gm22765-201ENSMUST00000158371 128 ntBASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Gm4222-201ENSMUST00000165784 470 ntBASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Gm25451-201ENSMUST00000177832 121 ntBASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Gm8649-201ENSMUST00000181799 233 ntBASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Gm29334-201ENSMUST00000190334 357 ntBASIC4.16□□□□□ -1.74
Trim54Q9ERP3 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.16□□□□□ -1.74
Trim54Q9ERP3 Gm37343-201ENSMUST00000192542 111 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 111.4 ms