Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm11797-201ENSMUST00000121336 754 ntBASIC2.88□□□□□ -1.95
Lima1Q9ERG0 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.88□□□□□ -1.95
Lima1Q9ERG0 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC2.88□□□□□ -1.95
Lima1Q9ERG0 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC2.88□□□□□ -1.95
Lima1Q9ERG0 Gm23895-201ENSMUST00000158108 160 ntBASIC2.88□□□□□ -1.95
Lima1Q9ERG0 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC2.88□□□□□ -1.95
Lima1Q9ERG0 Gm43746-201ENSMUST00000200028 317 ntBASIC2.88□□□□□ -1.95
Lima1Q9ERG0 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC2.88□□□□□ -1.95
Lima1Q9ERG0 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC2.88□□□□□ -1.95
Lima1Q9ERG0 Gm45588-201ENSMUST00000211213 630 ntBASIC2.88□□□□□ -1.95
Lima1Q9ERG0 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC2.88□□□□□ -1.95
Lima1Q9ERG0 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
Lima1Q9ERG0 CT009510.2-203ENSMUST00000226704 2136 ntBASIC2.88□□□□□ -1.95
Lima1Q9ERG0 AC115878.1-201ENSMUST00000227247 334 ntBASIC2.88□□□□□ -1.95
Lima1Q9ERG0 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Lima1Q9ERG0 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Lima1Q9ERG0 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Lima1Q9ERG0 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Lima1Q9ERG0 n-R5s166-201ENSMUST00000082898 121 ntBASIC2.88□□□□□ -1.95
Lima1Q9ERG0 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Lima1Q9ERG0 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.88□□□□□ -1.95
Lima1Q9ERG0 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Lima1Q9ERG0 Gm8675-201ENSMUST00000201408 1856 ntBASIC2.88□□□□□ -1.95
Lima1Q9ERG0 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
Lima1Q9ERG0 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Lima1Q9ERG0 Mir673-201ENSMUST00000102361 91 ntBASIC2.87□□□□□ -1.95
Lima1Q9ERG0 Gm14448-201ENSMUST00000116383 210 ntBASIC2.87□□□□□ -1.95
Lima1Q9ERG0 Gm11577-201ENSMUST00000118030 737 ntBASIC2.87□□□□□ -1.95
Lima1Q9ERG0 Gm15231-201ENSMUST00000119174 447 ntBASIC2.87□□□□□ -1.95
Lima1Q9ERG0 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC2.87□□□□□ -1.95
Lima1Q9ERG0 Gm12213-201ENSMUST00000119924 353 ntBASIC2.87□□□□□ -1.95
Lima1Q9ERG0 Gm12723-201ENSMUST00000120700 451 ntBASIC2.87□□□□□ -1.95
Lima1Q9ERG0 Gm11456-201ENSMUST00000121070 256 ntBASIC2.87□□□□□ -1.95
Lima1Q9ERG0 Gm14564-201ENSMUST00000122159 294 ntBASIC2.87□□□□□ -1.95
Lima1Q9ERG0 Gm14562-201ENSMUST00000129885 543 ntBASIC2.87□□□□□ -1.95
Lima1Q9ERG0 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC2.87□□□□□ -1.95
Lima1Q9ERG0 Gm8289-201ENSMUST00000144814 1182 ntBASIC2.87□□□□□ -1.95
Lima1Q9ERG0 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC2.87□□□□□ -1.95
Lima1Q9ERG0 Gm24730-201ENSMUST00000158228 117 ntBASIC2.87□□□□□ -1.95
Lima1Q9ERG0 Gm25898-201ENSMUST00000158303 106 ntBASIC2.87□□□□□ -1.95
Lima1Q9ERG0 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC2.87□□□□□ -1.95
Lima1Q9ERG0 Gm26297-201ENSMUST00000179464 132 ntBASIC2.87□□□□□ -1.95
Lima1Q9ERG0 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.87□□□□□ -1.95
Lima1Q9ERG0 Gm32340-201ENSMUST00000192883 259 ntBASIC2.87□□□□□ -1.95
Lima1Q9ERG0 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC2.87□□□□□ -1.95
Lima1Q9ERG0 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC2.87□□□□□ -1.95
Lima1Q9ERG0 AC093926.1-201ENSMUST00000213730 243 ntBASIC2.87□□□□□ -1.95
Lima1Q9ERG0 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Lima1Q9ERG0 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
Lima1Q9ERG0 AC167669.3-201ENSMUST00000224720 393 ntBASIC2.87□□□□□ -1.95
Lima1Q9ERG0 AC164116.2-201ENSMUST00000225398 1038 ntBASIC2.87□□□□□ -1.95
Lima1Q9ERG0 CT025525.1-201ENSMUST00000226325 1054 ntBASIC2.87□□□□□ -1.95
Lima1Q9ERG0 AC147545.1-201ENSMUST00000227528 108 ntBASIC2.87□□□□□ -1.95
Lima1Q9ERG0 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Lima1Q9ERG0 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC2.87□□□□□ -1.95
Lima1Q9ERG0 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.87□□□□□ -1.95
Lima1Q9ERG0 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
Lima1Q9ERG0 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.86□□□□□ -1.95
Lima1Q9ERG0 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.86□□□□□ -1.95
Lima1Q9ERG0 Gm14795-201ENSMUST00000118461 471 ntBASIC2.86□□□□□ -1.95
Lima1Q9ERG0 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC2.86□□□□□ -1.95
Lima1Q9ERG0 Gm25185-201ENSMUST00000157754 96 ntBASIC2.86□□□□□ -1.95
Lima1Q9ERG0 Gm25883-201ENSMUST00000157781 271 ntBASIC2.86□□□□□ -1.95
Lima1Q9ERG0 Gm22187-201ENSMUST00000157819 129 ntBASIC2.86□□□□□ -1.95
Lima1Q9ERG0 Gm23409-201ENSMUST00000158516 237 ntBASIC2.86□□□□□ -1.95
Lima1Q9ERG0 Gm26005-201ENSMUST00000158802 134 ntBASIC2.86□□□□□ -1.95
Lima1Q9ERG0 Gm16300-201ENSMUST00000160031 1279 ntBASIC2.86□□□□□ -1.95
Lima1Q9ERG0 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC2.86□□□□□ -1.95
Lima1Q9ERG0 Gm5967-201ENSMUST00000172723 494 ntBASIC2.86□□□□□ -1.95
Lima1Q9ERG0 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.86□□□□□ -1.95
Lima1Q9ERG0 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC2.86□□□□□ -1.95
Lima1Q9ERG0 Mir5123-201ENSMUST00000177794 83 ntBASIC2.86□□□□□ -1.95
Lima1Q9ERG0 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Lima1Q9ERG0 Gm27527-201ENSMUST00000183903 99 ntBASIC2.86□□□□□ -1.95
Lima1Q9ERG0 Mir8103-201ENSMUST00000183945 107 ntBASIC2.86□□□□□ -1.95
Lima1Q9ERG0 Gm27330-201ENSMUST00000184689 132 ntBASIC2.86□□□□□ -1.95
Lima1Q9ERG0 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Lima1Q9ERG0 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC2.86□□□□□ -1.95
Lima1Q9ERG0 Ighv1-40-201ENSMUST00000194231 345 ntBASIC2.86□□□□□ -1.95
Lima1Q9ERG0 Gm44118-201ENSMUST00000204665 229 ntBASIC2.86□□□□□ -1.95
Lima1Q9ERG0 Gm44964-201ENSMUST00000207011 273 ntBASIC2.86□□□□□ -1.95
Lima1Q9ERG0 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC2.86□□□□□ -1.95
Lima1Q9ERG0 AC159380.1-201ENSMUST00000218096 121 ntBASIC2.86□□□□□ -1.95
Lima1Q9ERG0 AC125531.1-201ENSMUST00000219849 221 ntBASIC2.86□□□□□ -1.95
Lima1Q9ERG0 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Lima1Q9ERG0 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Lima1Q9ERG0 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Lima1Q9ERG0 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Lima1Q9ERG0 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Lima1Q9ERG0 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Lima1Q9ERG0 Gm29730-201ENSMUST00000192986 1396 ntBASIC2.86□□□□□ -1.95
Lima1Q9ERG0 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Lima1Q9ERG0 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Lima1Q9ERG0 Gm25097-201ENSMUST00000104042 145 ntBASIC2.85□□□□□ -1.95
Lima1Q9ERG0 Mir878-201ENSMUST00000104680 78 ntBASIC2.85□□□□□ -1.95
Lima1Q9ERG0 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
Lima1Q9ERG0 Gm15282-201ENSMUST00000117707 300 ntBASIC2.85□□□□□ -1.95
Lima1Q9ERG0 Defa-ps5-201ENSMUST00000121541 279 ntBASIC2.85□□□□□ -1.95
Lima1Q9ERG0 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
Lima1Q9ERG0 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.85□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 115.6 ms