Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm18337-201ENSMUST00000219023 5762 ntBASIC3□□□□□ -1.93
Cdc40Q9DC48 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Cdc40Q9DC48 Gm12509-201ENSMUST00000118033 609 ntBASIC3□□□□□ -1.93
Cdc40Q9DC48 Gm12090-201ENSMUST00000118692 758 ntBASIC3□□□□□ -1.93
Cdc40Q9DC48 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
Cdc40Q9DC48 Gm23183-201ENSMUST00000122595 323 ntBASIC3□□□□□ -1.93
Cdc40Q9DC48 Gm25047-201ENSMUST00000122667 104 ntBASIC3□□□□□ -1.93
Cdc40Q9DC48 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC3□□□□□ -1.93
Cdc40Q9DC48 Gm26100-201ENSMUST00000157245 127 ntBASIC3□□□□□ -1.93
Cdc40Q9DC48 Gm22521-201ENSMUST00000158272 134 ntBASIC3□□□□□ -1.93
Cdc40Q9DC48 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
Cdc40Q9DC48 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
Cdc40Q9DC48 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Cdc40Q9DC48 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Cdc40Q9DC48 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC3□□□□□ -1.93
Cdc40Q9DC48 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Cdc40Q9DC48 Gm10925-201ENSMUST00000189941 678 ntBASIC3□□□□□ -1.93
Cdc40Q9DC48 Gm20811-201ENSMUST00000190500 553 ntBASIC3□□□□□ -1.93
Cdc40Q9DC48 Gm37098-201ENSMUST00000192290 244 ntBASIC3□□□□□ -1.93
Cdc40Q9DC48 Gm37817-201ENSMUST00000195276 434 ntBASIC3□□□□□ -1.93
Cdc40Q9DC48 Gm43489-201ENSMUST00000196810 993 ntBASIC3□□□□□ -1.93
Cdc40Q9DC48 Amd-ps5-201ENSMUST00000198406 989 ntBASIC3□□□□□ -1.93
Cdc40Q9DC48 AC155923.1-201ENSMUST00000215676 356 ntBASIC3□□□□□ -1.93
Cdc40Q9DC48 AC124399.1-201ENSMUST00000218334 590 ntBASIC3□□□□□ -1.93
Cdc40Q9DC48 AC137871.2-201ENSMUST00000226482 289 ntBASIC3□□□□□ -1.93
Cdc40Q9DC48 AC107453.2-201ENSMUST00000227714 655 ntBASIC3□□□□□ -1.93
Cdc40Q9DC48 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Cdc40Q9DC48 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Cdc40Q9DC48 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC3□□□□□ -1.93
Cdc40Q9DC48 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC3□□□□□ -1.93
Cdc40Q9DC48 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Cdc40Q9DC48 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC3□□□□□ -1.93
Cdc40Q9DC48 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC3□□□□□ -1.93
Cdc40Q9DC48 Gm45577-201ENSMUST00000210206 2287 ntBASIC3□□□□□ -1.93
Cdc40Q9DC48 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3□□□□□ -1.93
Cdc40Q9DC48 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Cdc40Q9DC48 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Cdc40Q9DC48 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Cdc40Q9DC48 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC2.99□□□□□ -1.93
Cdc40Q9DC48 Gm25560-201ENSMUST00000104606 176 ntBASIC2.99□□□□□ -1.93
Cdc40Q9DC48 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Cdc40Q9DC48 Gm13803-201ENSMUST00000117547 489 ntBASIC2.99□□□□□ -1.93
Cdc40Q9DC48 Gm7308-201ENSMUST00000121087 447 ntBASIC2.99□□□□□ -1.93
Cdc40Q9DC48 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC2.99□□□□□ -1.93
Cdc40Q9DC48 Gm25490-201ENSMUST00000158734 130 ntBASIC2.99□□□□□ -1.93
Cdc40Q9DC48 Gm22532-201ENSMUST00000158822 140 ntBASIC2.99□□□□□ -1.93
Cdc40Q9DC48 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC2.99□□□□□ -1.93
Cdc40Q9DC48 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Cdc40Q9DC48 Gm27715-201ENSMUST00000184714 260 ntBASIC2.99□□□□□ -1.93
Cdc40Q9DC48 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC2.99□□□□□ -1.93
Cdc40Q9DC48 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC2.99□□□□□ -1.93
Cdc40Q9DC48 Gm35931-201ENSMUST00000203931 448 ntBASIC2.99□□□□□ -1.93
Cdc40Q9DC48 Gm44548-201ENSMUST00000208929 192 ntBASIC2.99□□□□□ -1.93
Cdc40Q9DC48 Gm45409-201ENSMUST00000211486 252 ntBASIC2.99□□□□□ -1.93
Cdc40Q9DC48 AC151843.1-201ENSMUST00000215960 691 ntBASIC2.99□□□□□ -1.93
Cdc40Q9DC48 Gm18228-201ENSMUST00000217297 1091 ntBASIC2.99□□□□□ -1.93
Cdc40Q9DC48 Gm46234-201ENSMUST00000218702 259 ntBASIC2.99□□□□□ -1.93
Cdc40Q9DC48 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Cdc40Q9DC48 AC117588.3-201ENSMUST00000228517 325 ntBASIC2.99□□□□□ -1.93
Cdc40Q9DC48 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Cdc40Q9DC48 Gm9845-201ENSMUST00000056409 598 ntBASIC2.99□□□□□ -1.93
Cdc40Q9DC48 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Cdc40Q9DC48 Gm23136-201ENSMUST00000083425 99 ntBASIC2.99□□□□□ -1.93
Cdc40Q9DC48 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Cdc40Q9DC48 Gm45130-201ENSMUST00000207574 3388 ntBASIC2.99□□□□□ -1.93
Cdc40Q9DC48 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
Cdc40Q9DC48 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Cdc40Q9DC48 Gm44715-201ENSMUST00000209049 3839 ntBASIC2.98□□□□□ -1.93
Cdc40Q9DC48 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC2.98□□□□□ -1.93
Cdc40Q9DC48 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC2.98□□□□□ -1.93
Cdc40Q9DC48 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Cdc40Q9DC48 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC2.98□□□□□ -1.93
Cdc40Q9DC48 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Cdc40Q9DC48 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Cdc40Q9DC48 Gm13471-201ENSMUST00000122057 433 ntBASIC2.98□□□□□ -1.93
Cdc40Q9DC48 Gm22718-201ENSMUST00000122701 315 ntBASIC2.98□□□□□ -1.93
Cdc40Q9DC48 Gm26027-201ENSMUST00000122725 268 ntBASIC2.98□□□□□ -1.93
Cdc40Q9DC48 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Cdc40Q9DC48 Gm22766-201ENSMUST00000158372 99 ntBASIC2.98□□□□□ -1.93
Cdc40Q9DC48 Gm24773-201ENSMUST00000158513 99 ntBASIC2.98□□□□□ -1.93
Cdc40Q9DC48 Gm32340-201ENSMUST00000192883 259 ntBASIC2.98□□□□□ -1.93
Cdc40Q9DC48 Gm37629-201ENSMUST00000193635 1050 ntBASIC2.98□□□□□ -1.93
Cdc40Q9DC48 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC2.98□□□□□ -1.93
Cdc40Q9DC48 Gm43899-201ENSMUST00000203675 246 ntBASIC2.98□□□□□ -1.93
Cdc40Q9DC48 Gm44727-201ENSMUST00000204225 451 ntBASIC2.98□□□□□ -1.93
Cdc40Q9DC48 Gm43932-201ENSMUST00000204499 52 ntBASIC2.98□□□□□ -1.93
Cdc40Q9DC48 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC2.98□□□□□ -1.93
Cdc40Q9DC48 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC2.98□□□□□ -1.93
Cdc40Q9DC48 Gm45860-201ENSMUST00000212700 334 ntBASIC2.98□□□□□ -1.93
Cdc40Q9DC48 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC2.98□□□□□ -1.93
Cdc40Q9DC48 AC134254.4-201ENSMUST00000223086 370 ntBASIC2.98□□□□□ -1.93
Cdc40Q9DC48 AC154426.1-201ENSMUST00000225614 1132 ntBASIC2.98□□□□□ -1.93
Cdc40Q9DC48 AC164100.1-201ENSMUST00000227214 508 ntBASIC2.98□□□□□ -1.93
Cdc40Q9DC48 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Cdc40Q9DC48 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
Cdc40Q9DC48 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Cdc40Q9DC48 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Cdc40Q9DC48 Gm25699-201ENSMUST00000082896 167 ntBASIC2.98□□□□□ -1.93
Cdc40Q9DC48 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Cdc40Q9DC48 Gm18300-201ENSMUST00000192792 1406 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms