Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm17929-201ENSMUST00000186851 627 ntBASIC3.86□□□□□ -1.79
Vps28Q9D1C8 Gm29600-201ENSMUST00000188687 377 ntBASIC3.86□□□□□ -1.79
Vps28Q9D1C8 Gm29740-201ENSMUST00000193182 655 ntBASIC3.86□□□□□ -1.79
Vps28Q9D1C8 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC3.86□□□□□ -1.79
Vps28Q9D1C8 Gm18429-201ENSMUST00000198707 421 ntBASIC3.86□□□□□ -1.79
Vps28Q9D1C8 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Vps28Q9D1C8 Gm7041-201ENSMUST00000201227 524 ntBASIC3.86□□□□□ -1.79
Vps28Q9D1C8 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.86□□□□□ -1.79
Vps28Q9D1C8 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC3.86□□□□□ -1.79
Vps28Q9D1C8 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.86□□□□□ -1.79
Vps28Q9D1C8 Gm19137-201ENSMUST00000213790 1164 ntBASIC3.86□□□□□ -1.79
Vps28Q9D1C8 CR974485.1-201ENSMUST00000222408 402 ntBASIC3.86□□□□□ -1.79
Vps28Q9D1C8 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Vps28Q9D1C8 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Vps28Q9D1C8 Gm25592-201ENSMUST00000082635 131 ntBASIC3.86□□□□□ -1.79
Vps28Q9D1C8 Gm23448-201ENSMUST00000083151 104 ntBASIC3.86□□□□□ -1.79
Vps28Q9D1C8 Gm25792-201ENSMUST00000083289 100 ntBASIC3.86□□□□□ -1.79
Vps28Q9D1C8 Gm25008-201ENSMUST00000083809 81 ntBASIC3.86□□□□□ -1.79
Vps28Q9D1C8 Gm10704-201ENSMUST00000098952 730 ntBASIC3.86□□□□□ -1.79
Vps28Q9D1C8 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.86□□□□□ -1.79
Vps28Q9D1C8 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Vps28Q9D1C8 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.86□□□□□ -1.79
Vps28Q9D1C8 Gm43751-201ENSMUST00000200275 3071 ntBASIC3.86□□□□□ -1.79
Vps28Q9D1C8 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Gm13239-201ENSMUST00000119920 637 ntBASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Gm7308-201ENSMUST00000121087 447 ntBASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Gm23887-201ENSMUST00000122683 172 ntBASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Gm4916-201ENSMUST00000126139 642 ntBASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Gm24998-201ENSMUST00000157908 89 ntBASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Gm23317-201ENSMUST00000157999 129 ntBASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Gm4761-201ENSMUST00000178086 582 ntBASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Gm23648-201ENSMUST00000180301 107 ntBASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Gm27676-201ENSMUST00000183669 61 ntBASIC3.85□□□□□ -1.79
Vps28Q9D1C8 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Gm37001-201ENSMUST00000193377 190 ntBASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Gm19620-201ENSMUST00000195972 434 ntBASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Gm42465-201ENSMUST00000197036 492 ntBASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Gm43171-201ENSMUST00000199882 291 ntBASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Gm18691-201ENSMUST00000203593 872 ntBASIC3.85□□□□□ -1.79
Vps28Q9D1C8 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Gm18672-201ENSMUST00000208035 270 ntBASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Gm44887-201ENSMUST00000208980 178 ntBASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Gm45614-201ENSMUST00000209994 721 ntBASIC3.85□□□□□ -1.79
Vps28Q9D1C8 AC157017.2-201ENSMUST00000218354 777 ntBASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.85□□□□□ -1.79
Vps28Q9D1C8 AC138718.1-201ENSMUST00000225947 1009 ntBASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Gm9818-201ENSMUST00000050900 255 ntBASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Gm23506-201ENSMUST00000083077 107 ntBASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.85□□□□□ -1.79
Vps28Q9D1C8 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Vps28Q9D1C8 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Vps28Q9D1C8 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Gm23256-201ENSMUST00000102235 110 ntBASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Gm26140-201ENSMUST00000103807 110 ntBASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Gm24096-201ENSMUST00000103905 110 ntBASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Gm14537-201ENSMUST00000117464 599 ntBASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Gm17183-201ENSMUST00000171170 493 ntBASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Gm22908-201ENSMUST00000177620 110 ntBASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Gm8676-201ENSMUST00000184206 637 ntBASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.84□□□□□ -1.79
Vps28Q9D1C8 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Gm37946-201ENSMUST00000192064 347 ntBASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.84□□□□□ -1.79
Vps28Q9D1C8 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Gm44212-201ENSMUST00000205016 897 ntBASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Vps28Q9D1C8 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.84□□□□□ -1.79
Vps28Q9D1C8 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC3.84□□□□□ -1.79
Vps28Q9D1C8 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms