Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC4.55□□□□□ -1.68
Ddx56Q9D0R4 Gm8604-201ENSMUST00000183150 965 ntBASIC4.55□□□□□ -1.68
Ddx56Q9D0R4 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC4.55□□□□□ -1.68
Ddx56Q9D0R4 Gm27845-201ENSMUST00000184479 114 ntBASIC4.55□□□□□ -1.68
Ddx56Q9D0R4 Gm27308-201ENSMUST00000184807 233 ntBASIC4.55□□□□□ -1.68
Ddx56Q9D0R4 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC4.55□□□□□ -1.68
Ddx56Q9D0R4 Gm38261-201ENSMUST00000192608 316 ntBASIC4.55□□□□□ -1.68
Ddx56Q9D0R4 Gm37119-201ENSMUST00000195691 389 ntBASIC4.55□□□□□ -1.68
Ddx56Q9D0R4 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC4.55□□□□□ -1.68
Ddx56Q9D0R4 AC153526.4-201ENSMUST00000217713 379 ntBASIC4.55□□□□□ -1.68
Ddx56Q9D0R4 CT025603.4-201ENSMUST00000225777 413 ntBASIC4.55□□□□□ -1.68
Ddx56Q9D0R4 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC4.55□□□□□ -1.68
Ddx56Q9D0R4 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Ddx56Q9D0R4 Olfr944-201ENSMUST00000079650 936 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Ddx56Q9D0R4 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.55□□□□□ -1.68
Ddx56Q9D0R4 Gm23645-201ENSMUST00000083228 108 ntBASIC4.55□□□□□ -1.68
Ddx56Q9D0R4 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.55□□□□□ -1.68
Ddx56Q9D0R4 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Ddx56Q9D0R4 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.55□□□□□ -1.68
Ddx56Q9D0R4 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Ddx56Q9D0R4 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
Ddx56Q9D0R4 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
Ddx56Q9D0R4 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Ddx56Q9D0R4 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Ddx56Q9D0R4 Gm23063-201ENSMUST00000102350 93 ntBASIC4.54□□□□□ -1.68
Ddx56Q9D0R4 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Ddx56Q9D0R4 Gm14304-201ENSMUST00000117272 446 ntBASIC4.54□□□□□ -1.68
Ddx56Q9D0R4 Gm14975-201ENSMUST00000118741 664 ntBASIC4.54□□□□□ -1.68
Ddx56Q9D0R4 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.54□□□□□ -1.68
Ddx56Q9D0R4 Gm11522-201ENSMUST00000120533 176 ntBASIC4.54□□□□□ -1.68
Ddx56Q9D0R4 Gm8200-201ENSMUST00000122390 222 ntBASIC4.54□□□□□ -1.68
Ddx56Q9D0R4 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Ddx56Q9D0R4 Gm25559-201ENSMUST00000157182 74 ntBASIC4.54□□□□□ -1.68
Ddx56Q9D0R4 Mir3090-201ENSMUST00000175597 87 ntBASIC4.54□□□□□ -1.68
Ddx56Q9D0R4 Gm20663-201ENSMUST00000176647 474 ntTSL 3 BASIC4.54□□□□□ -1.68
Ddx56Q9D0R4 Mir6338-201ENSMUST00000183389 109 ntBASIC4.54□□□□□ -1.68
Ddx56Q9D0R4 Gm27313-201ENSMUST00000183500 142 ntBASIC4.54□□□□□ -1.68
Ddx56Q9D0R4 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.54□□□□□ -1.68
Ddx56Q9D0R4 Gm18403-201ENSMUST00000192907 529 ntBASIC4.54□□□□□ -1.68
Ddx56Q9D0R4 Gm19089-201ENSMUST00000197207 613 ntBASIC4.54□□□□□ -1.68
Ddx56Q9D0R4 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.54□□□□□ -1.68
Ddx56Q9D0R4 Gm46138-201ENSMUST00000215294 426 ntBASIC4.54□□□□□ -1.68
Ddx56Q9D0R4 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.54□□□□□ -1.68
Ddx56Q9D0R4 CT030705.1-201ENSMUST00000223971 533 ntBASIC4.54□□□□□ -1.68
Ddx56Q9D0R4 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.54□□□□□ -1.68
Ddx56Q9D0R4 AC107453.2-201ENSMUST00000227714 655 ntBASIC4.54□□□□□ -1.68
Ddx56Q9D0R4 AC131029.2-202ENSMUST00000228430 496 ntBASIC4.54□□□□□ -1.68
Ddx56Q9D0R4 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.54□□□□□ -1.68
Ddx56Q9D0R4 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Ddx56Q9D0R4 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Gm15560-201ENSMUST00000117107 643 ntBASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Gm11576-201ENSMUST00000117433 417 ntBASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Gm13728-201ENSMUST00000117471 400 ntBASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Gm11448-201ENSMUST00000120427 450 ntBASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Gm10444-201ENSMUST00000126708 148 ntBASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Gm16060-201ENSMUST00000153140 478 ntBASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Gm23906-201ENSMUST00000157573 128 ntBASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Gm22849-201ENSMUST00000157713 307 ntBASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Gm22312-201ENSMUST00000158005 130 ntBASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Gm3370-201ENSMUST00000171785 500 ntBASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Mir5129-201ENSMUST00000174938 78 ntBASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Gm21729-201ENSMUST00000180058 664 ntBASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Gm21853-201ENSMUST00000180071 664 ntBASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Gm8816-201ENSMUST00000182280 1163 ntBASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Gm27254-201ENSMUST00000183926 517 ntBASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Gm27539-201ENSMUST00000184971 224 ntBASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Gm29495-201ENSMUST00000189319 664 ntBASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Gm29192-201ENSMUST00000190942 377 ntBASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Gm17781-201ENSMUST00000195232 649 ntBASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Gm44765-201ENSMUST00000206927 601 ntBASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 CT025689.4-201ENSMUST00000225926 601 ntBASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 AC154371.1-201ENSMUST00000226600 412 ntBASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 AC139350.4-201ENSMUST00000228483 798 ntBASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Ddx56Q9D0R4 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.69
Ddx56Q9D0R4 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms