Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm14578-201ENSMUST00000122166 391 ntBASIC3.78□□□□□ -1.8
Ccdc43Q9CR29 Gm23602-201ENSMUST00000157258 132 ntBASIC3.78□□□□□ -1.8
Ccdc43Q9CR29 Gm23819-201ENSMUST00000158744 109 ntBASIC3.78□□□□□ -1.8
Ccdc43Q9CR29 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Ccdc43Q9CR29 Gm27999-201ENSMUST00000183539 193 ntBASIC3.78□□□□□ -1.8
Ccdc43Q9CR29 Gm38018-201ENSMUST00000195651 540 ntBASIC3.78□□□□□ -1.8
Ccdc43Q9CR29 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC3.78□□□□□ -1.8
Ccdc43Q9CR29 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.78□□□□□ -1.8
Ccdc43Q9CR29 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.78□□□□□ -1.8
Ccdc43Q9CR29 Gm18015-201ENSMUST00000214879 316 ntBASIC3.78□□□□□ -1.8
Ccdc43Q9CR29 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC3.78□□□□□ -1.8
Ccdc43Q9CR29 Gm18921-201ENSMUST00000221798 366 ntBASIC3.78□□□□□ -1.8
Ccdc43Q9CR29 Gm18026-201ENSMUST00000222789 727 ntBASIC3.78□□□□□ -1.8
Ccdc43Q9CR29 AC154594.1-201ENSMUST00000225171 1273 ntBASIC3.78□□□□□ -1.8
Ccdc43Q9CR29 CT025525.1-201ENSMUST00000226325 1054 ntBASIC3.78□□□□□ -1.8
Ccdc43Q9CR29 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Ccdc43Q9CR29 Olfr1193-201ENSMUST00000081697 957 ntBASIC3.78□□□□□ -1.8
Ccdc43Q9CR29 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Ccdc43Q9CR29 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Ccdc43Q9CR29 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.78□□□□□ -1.8
Ccdc43Q9CR29 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Ccdc43Q9CR29 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 Mir291a-201ENSMUST00000104815 82 ntBASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 Gm14931-201ENSMUST00000111079 253 ntBASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 Gm14811-201ENSMUST00000117070 117 ntBASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 Gm7974-201ENSMUST00000117154 408 ntBASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 Gm9157-201ENSMUST00000117673 225 ntBASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 Gm7429-201ENSMUST00000118664 348 ntBASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 Gm24998-201ENSMUST00000157908 89 ntBASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 Gm22766-201ENSMUST00000158372 99 ntBASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 Gm17063-201ENSMUST00000168135 456 ntBASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 Gm23415-201ENSMUST00000175519 83 ntBASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 Gm18667-201ENSMUST00000186523 484 ntBASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 Scgb2b6-201ENSMUST00000188132 330 ntBASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 Gm42465-201ENSMUST00000197036 492 ntBASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 Gm42828-201ENSMUST00000199669 469 ntBASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 Gm43441-201ENSMUST00000201458 205 ntBASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 Gm35931-201ENSMUST00000203931 448 ntBASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 Gm45696-201ENSMUST00000212088 985 ntBASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 Gm19137-201ENSMUST00000213790 1164 ntBASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 Gm35405-201ENSMUST00000218754 400 ntBASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 Gm3333-202ENSMUST00000221763 1044 ntBASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 AC125523.1-201ENSMUST00000228018 934 ntBASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 Gm7648-201ENSMUST00000173036 1658 ntBASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Ccdc43Q9CR29 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 Gm12722-201ENSMUST00000118507 493 ntBASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 Gm14687-201ENSMUST00000120206 363 ntBASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 Gm20534-201ENSMUST00000172957 172 ntBASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 Gm26141-201ENSMUST00000175299 126 ntBASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 Gm37989-201ENSMUST00000195202 803 ntBASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 Gm43541-201ENSMUST00000197208 581 ntBASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 Gm44954-201ENSMUST00000208513 227 ntBASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 Gm7751-201ENSMUST00000212868 709 ntBASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 CT030184.1-201ENSMUST00000222393 416 ntBASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 Snora70-201ENSMUST00000083047 137 ntBASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Ccdc43Q9CR29 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 Gm14898-201ENSMUST00000120202 645 ntBASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 Gm14238-201ENSMUST00000120227 323 ntBASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 Gm7308-201ENSMUST00000121087 447 ntBASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 Gm26254-201ENSMUST00000122491 118 ntBASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 Gm23755-201ENSMUST00000157578 343 ntBASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 Gm24505-201ENSMUST00000157682 126 ntBASIC3.75□□□□□ -1.81
Ccdc43Q9CR29 Gm23666-201ENSMUST00000158053 116 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms