Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm28113-201ENSMUST00000188280 229 ntBASIC2.97□□□□□ -1.93
Rpa3Q9CQ71 Gm28358-202ENSMUST00000189292 223 ntBASIC2.97□□□□□ -1.93
Rpa3Q9CQ71 Gm38329-201ENSMUST00000193473 427 ntBASIC2.97□□□□□ -1.93
Rpa3Q9CQ71 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC2.97□□□□□ -1.93
Rpa3Q9CQ71 Gm37007-201ENSMUST00000194234 319 ntBASIC2.97□□□□□ -1.93
Rpa3Q9CQ71 Gm43478-201ENSMUST00000200381 292 ntBASIC2.97□□□□□ -1.93
Rpa3Q9CQ71 Gm9375-201ENSMUST00000208899 903 ntBASIC2.97□□□□□ -1.93
Rpa3Q9CQ71 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.97□□□□□ -1.93
Rpa3Q9CQ71 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
Rpa3Q9CQ71 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC2.97□□□□□ -1.93
Rpa3Q9CQ71 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC2.97□□□□□ -1.93
Rpa3Q9CQ71 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.97□□□□□ -1.93
Rpa3Q9CQ71 AC134860.6-201ENSMUST00000226038 285 ntBASIC2.97□□□□□ -1.93
Rpa3Q9CQ71 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.97□□□□□ -1.93
Rpa3Q9CQ71 AC139845.2-201ENSMUST00000227504 436 ntBASIC2.97□□□□□ -1.93
Rpa3Q9CQ71 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Rpa3Q9CQ71 Olfr203-201ENSMUST00000089305 924 ntBASIC2.97□□□□□ -1.93
Rpa3Q9CQ71 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Rpa3Q9CQ71 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
Rpa3Q9CQ71 AC126673.3-201ENSMUST00000223414 3829 ntBASIC2.97□□□□□ -1.93
Rpa3Q9CQ71 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Rpa3Q9CQ71 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Rpa3Q9CQ71 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Snord14c-201ENSMUST00000101927 86 ntBASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Gm8260-201ENSMUST00000119230 353 ntBASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Gm14591-201ENSMUST00000120407 518 ntBASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Gm14577-201ENSMUST00000121134 256 ntBASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Gm14253-201ENSMUST00000122112 639 ntBASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Snord93-201ENSMUST00000175580 71 ntBASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Gm26915-201ENSMUST00000183080 748 ntBASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Gm6140-201ENSMUST00000192494 966 ntBASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Gm36974-201ENSMUST00000194200 1071 ntBASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Gm43384-201ENSMUST00000200569 637 ntBASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Gm44425-201ENSMUST00000203739 429 ntBASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Gm44030-201ENSMUST00000204865 432 ntBASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Gm18602-201ENSMUST00000209794 851 ntBASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Gm45400-201ENSMUST00000211603 653 ntBASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Gm4928-201ENSMUST00000219622 850 ntBASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 AC116395.1-201ENSMUST00000225480 1143 ntBASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 CT025525.3-201ENSMUST00000228858 366 ntBASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.96□□□□□ -1.94
Rpa3Q9CQ71 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Rpa3Q9CQ71 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Rpa3Q9CQ71 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC2.95□□□□□ -1.94
Rpa3Q9CQ71 Gm15272-201ENSMUST00000120865 233 ntBASIC2.95□□□□□ -1.94
Rpa3Q9CQ71 Gm12412-201ENSMUST00000121867 328 ntBASIC2.95□□□□□ -1.94
Rpa3Q9CQ71 Gm12819-201ENSMUST00000122223 629 ntBASIC2.95□□□□□ -1.94
Rpa3Q9CQ71 Gm15116-201ENSMUST00000122248 663 ntBASIC2.95□□□□□ -1.94
Rpa3Q9CQ71 Gm24443-201ENSMUST00000157242 132 ntBASIC2.95□□□□□ -1.94
Rpa3Q9CQ71 Gm22330-201ENSMUST00000158068 115 ntBASIC2.95□□□□□ -1.94
Rpa3Q9CQ71 Gm24736-201ENSMUST00000158862 130 ntBASIC2.95□□□□□ -1.94
Rpa3Q9CQ71 Gm27477-201ENSMUST00000184649 143 ntBASIC2.95□□□□□ -1.94
Rpa3Q9CQ71 Gm6501-201ENSMUST00000187178 916 ntBASIC2.95□□□□□ -1.94
Rpa3Q9CQ71 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC2.95□□□□□ -1.94
Rpa3Q9CQ71 Gm8242-202ENSMUST00000193056 475 ntBASIC2.95□□□□□ -1.94
Rpa3Q9CQ71 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC2.95□□□□□ -1.94
Rpa3Q9CQ71 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.95□□□□□ -1.94
Rpa3Q9CQ71 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC2.95□□□□□ -1.94
Rpa3Q9CQ71 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.95□□□□□ -1.94
Rpa3Q9CQ71 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Rpa3Q9CQ71 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Rpa3Q9CQ71 Gm24611-201ENSMUST00000083272 107 ntBASIC2.95□□□□□ -1.94
Rpa3Q9CQ71 Gm26176-201ENSMUST00000083795 105 ntBASIC2.95□□□□□ -1.94
Rpa3Q9CQ71 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Rpa3Q9CQ71 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Rpa3Q9CQ71 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Rpa3Q9CQ71 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
Rpa3Q9CQ71 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Rpa3Q9CQ71 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
Rpa3Q9CQ71 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
Rpa3Q9CQ71 Gm15108-201ENSMUST00000116160 803 ntBASIC2.94□□□□□ -1.94
Rpa3Q9CQ71 Gm14142-201ENSMUST00000117833 296 ntBASIC2.94□□□□□ -1.94
Rpa3Q9CQ71 Gm15111-201ENSMUST00000122142 878 ntBASIC2.94□□□□□ -1.94
Rpa3Q9CQ71 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC2.94□□□□□ -1.94
Rpa3Q9CQ71 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC2.94□□□□□ -1.94
Rpa3Q9CQ71 Gm17166-201ENSMUST00000172006 431 ntBASIC2.94□□□□□ -1.94
Rpa3Q9CQ71 Gm27527-201ENSMUST00000183903 99 ntBASIC2.94□□□□□ -1.94
Rpa3Q9CQ71 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
Rpa3Q9CQ71 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC2.94□□□□□ -1.94
Rpa3Q9CQ71 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC2.94□□□□□ -1.94
Rpa3Q9CQ71 Trbv27-201ENSMUST00000193711 277 ntBASIC2.94□□□□□ -1.94
Rpa3Q9CQ71 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC2.94□□□□□ -1.94
Rpa3Q9CQ71 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms