Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Trbv11-201ENSMUST00000194354 260 ntBASIC3.94□□□□□ -1.78
Msh4Q99MT2 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC3.94□□□□□ -1.78
Msh4Q99MT2 Gm43855-201ENSMUST00000197462 507 ntBASIC3.94□□□□□ -1.78
Msh4Q99MT2 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC3.94□□□□□ -1.78
Msh4Q99MT2 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC3.94□□□□□ -1.78
Msh4Q99MT2 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC3.94□□□□□ -1.78
Msh4Q99MT2 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.94□□□□□ -1.78
Msh4Q99MT2 AC139845.2-201ENSMUST00000227504 436 ntBASIC3.94□□□□□ -1.78
Msh4Q99MT2 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Msh4Q99MT2 Gm38091-201ENSMUST00000192418 3871 ntBASIC3.94□□□□□ -1.78
Msh4Q99MT2 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Msh4Q99MT2 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Msh4Q99MT2 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Msh4Q99MT2 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Msh4Q99MT2 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.94□□□□□ -1.78
Msh4Q99MT2 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Msh4Q99MT2 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Msh4Q99MT2 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Msh4Q99MT2 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.93□□□□□ -1.78
Msh4Q99MT2 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
Msh4Q99MT2 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
Msh4Q99MT2 Gm7195-201ENSMUST00000190869 1707 ntBASIC3.93□□□□□ -1.78
Msh4Q99MT2 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Msh4Q99MT2 Gm24273-201ENSMUST00000102332 164 ntBASIC3.93□□□□□ -1.78
Msh4Q99MT2 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.93□□□□□ -1.78
Msh4Q99MT2 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.93□□□□□ -1.78
Msh4Q99MT2 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC3.93□□□□□ -1.78
Msh4Q99MT2 Gm11408-201ENSMUST00000117889 519 ntBASIC3.93□□□□□ -1.78
Msh4Q99MT2 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.93□□□□□ -1.78
Msh4Q99MT2 Gm14541-201ENSMUST00000118985 157 ntBASIC3.93□□□□□ -1.78
Msh4Q99MT2 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Msh4Q99MT2 Gm23167-201ENSMUST00000157155 103 ntBASIC3.93□□□□□ -1.78
Msh4Q99MT2 Gm25706-201ENSMUST00000157828 247 ntBASIC3.93□□□□□ -1.78
Msh4Q99MT2 Gm26001-201ENSMUST00000157989 103 ntBASIC3.93□□□□□ -1.78
Msh4Q99MT2 Gm22135-201ENSMUST00000158752 108 ntBASIC3.93□□□□□ -1.78
Msh4Q99MT2 Gm15946-201ENSMUST00000160654 423 ntBASIC3.93□□□□□ -1.78
Msh4Q99MT2 Gm17155-201ENSMUST00000165969 473 ntBASIC3.93□□□□□ -1.78
Msh4Q99MT2 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Msh4Q99MT2 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Msh4Q99MT2 Gm26960-201ENSMUST00000182263 412 ntBASIC3.93□□□□□ -1.78
Msh4Q99MT2 Mir6541-201ENSMUST00000183649 110 ntBASIC3.93□□□□□ -1.78
Msh4Q99MT2 Gm27957-201ENSMUST00000184054 127 ntBASIC3.93□□□□□ -1.78
Msh4Q99MT2 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC3.93□□□□□ -1.78
Msh4Q99MT2 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC3.93□□□□□ -1.78
Msh4Q99MT2 Gm38044-201ENSMUST00000192964 487 ntBASIC3.93□□□□□ -1.78
Msh4Q99MT2 Gm43541-201ENSMUST00000197208 581 ntBASIC3.93□□□□□ -1.78
Msh4Q99MT2 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC3.93□□□□□ -1.78
Msh4Q99MT2 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC3.93□□□□□ -1.78
Msh4Q99MT2 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Msh4Q99MT2 AC116589.1-201ENSMUST00000220634 327 ntBASIC3.93□□□□□ -1.78
Msh4Q99MT2 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Msh4Q99MT2 AC159621.1-201ENSMUST00000223249 163 ntBASIC3.93□□□□□ -1.78
Msh4Q99MT2 AC174797.3-202ENSMUST00000224578 587 ntBASIC3.93□□□□□ -1.78
Msh4Q99MT2 Mir19a-201ENSMUST00000083482 82 ntBASIC3.93□□□□□ -1.78
Msh4Q99MT2 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Msh4Q99MT2 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Msh4Q99MT2 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Msh4Q99MT2 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Msh4Q99MT2 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Msh4Q99MT2 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.92□□□□□ -1.78
Msh4Q99MT2 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
Msh4Q99MT2 Gm7452-202ENSMUST00000202891 3039 ntBASIC3.92□□□□□ -1.78
Msh4Q99MT2 Gm42447-201ENSMUST00000200102 2903 ntBASIC3.92□□□□□ -1.78
Msh4Q99MT2 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Msh4Q99MT2 Gm44438-201ENSMUST00000204388 3236 ntBASIC3.92□□□□□ -1.78
Msh4Q99MT2 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Msh4Q99MT2 Gm22269-201ENSMUST00000104002 130 ntBASIC3.92□□□□□ -1.78
Msh4Q99MT2 Gm23319-201ENSMUST00000104467 131 ntBASIC3.92□□□□□ -1.78
Msh4Q99MT2 Gm9078-201ENSMUST00000119126 617 ntBASIC3.92□□□□□ -1.78
Msh4Q99MT2 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC3.92□□□□□ -1.78
Msh4Q99MT2 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Msh4Q99MT2 Gm11692-201ENSMUST00000122121 902 ntBASIC3.92□□□□□ -1.78
Msh4Q99MT2 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Msh4Q99MT2 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC3.92□□□□□ -1.78
Msh4Q99MT2 Gm26362-201ENSMUST00000158865 315 ntBASIC3.92□□□□□ -1.78
Msh4Q99MT2 Gm16101-201ENSMUST00000160695 430 ntBASIC3.92□□□□□ -1.78
Msh4Q99MT2 Gm2343-201ENSMUST00000161177 1042 ntBASIC3.92□□□□□ -1.78
Msh4Q99MT2 Mir3066-201ENSMUST00000175296 83 ntBASIC3.92□□□□□ -1.78
Msh4Q99MT2 Gm25670-201ENSMUST00000178423 107 ntBASIC3.92□□□□□ -1.78
Msh4Q99MT2 Gm26239-201ENSMUST00000178842 107 ntBASIC3.92□□□□□ -1.78
Msh4Q99MT2 Gm24267-201ENSMUST00000179841 107 ntBASIC3.92□□□□□ -1.78
Msh4Q99MT2 Mir6996-201ENSMUST00000183922 61 ntBASIC3.92□□□□□ -1.78
Msh4Q99MT2 Mir6382-201ENSMUST00000184055 110 ntBASIC3.92□□□□□ -1.78
Msh4Q99MT2 Gm27695-201ENSMUST00000184301 91 ntBASIC3.92□□□□□ -1.78
Msh4Q99MT2 Gm27477-201ENSMUST00000184649 143 ntBASIC3.92□□□□□ -1.78
Msh4Q99MT2 Gm27952-201ENSMUST00000184748 105 ntBASIC3.92□□□□□ -1.78
Msh4Q99MT2 Gm28489-201ENSMUST00000186655 316 ntBASIC3.92□□□□□ -1.78
Msh4Q99MT2 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Msh4Q99MT2 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC3.92□□□□□ -1.78
Msh4Q99MT2 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC3.92□□□□□ -1.78
Msh4Q99MT2 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.92□□□□□ -1.78
Msh4Q99MT2 Gm43224-201ENSMUST00000201567 898 ntBASIC3.92□□□□□ -1.78
Msh4Q99MT2 Gm44076-201ENSMUST00000203072 520 ntBASIC3.92□□□□□ -1.78
Msh4Q99MT2 Gm44720-201ENSMUST00000206076 260 ntBASIC3.92□□□□□ -1.78
Msh4Q99MT2 Gm45173-201ENSMUST00000206819 305 ntBASIC3.92□□□□□ -1.78
Msh4Q99MT2 Gm45614-201ENSMUST00000209994 721 ntBASIC3.92□□□□□ -1.78
Msh4Q99MT2 AC160134.1-201ENSMUST00000213450 551 ntBASIC3.92□□□□□ -1.78
Msh4Q99MT2 Gm18160-201ENSMUST00000214279 827 ntBASIC3.92□□□□□ -1.78
Msh4Q99MT2 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC3.92□□□□□ -1.78
Msh4Q99MT2 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms