Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm19620-201ENSMUST00000195972 434 ntBASIC3.37□□□□□ -1.87
Cstf1Q99LC2 Amd-ps5-201ENSMUST00000198406 989 ntBASIC3.37□□□□□ -1.87
Cstf1Q99LC2 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Cstf1Q99LC2 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC3.37□□□□□ -1.87
Cstf1Q99LC2 Gm19233-201ENSMUST00000219772 936 ntBASIC3.37□□□□□ -1.87
Cstf1Q99LC2 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.37□□□□□ -1.87
Cstf1Q99LC2 AC166830.1-201ENSMUST00000224201 533 ntBASIC3.37□□□□□ -1.87
Cstf1Q99LC2 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.37□□□□□ -1.87
Cstf1Q99LC2 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.37□□□□□ -1.87
Cstf1Q99LC2 Gm9818-201ENSMUST00000050900 255 ntBASIC3.37□□□□□ -1.87
Cstf1Q99LC2 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Cstf1Q99LC2 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.37□□□□□ -1.87
Cstf1Q99LC2 Gm6545-201ENSMUST00000217186 1786 ntBASIC3.37□□□□□ -1.87
Cstf1Q99LC2 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Cstf1Q99LC2 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cstf1Q99LC2 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.36□□□□□ -1.87
Cstf1Q99LC2 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Cstf1Q99LC2 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cstf1Q99LC2 Mir592-201ENSMUST00000102113 96 ntBASIC3.36□□□□□ -1.87
Cstf1Q99LC2 Gm12090-201ENSMUST00000118692 758 ntBASIC3.36□□□□□ -1.87
Cstf1Q99LC2 Gm12071-201ENSMUST00000121968 469 ntBASIC3.36□□□□□ -1.87
Cstf1Q99LC2 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.36□□□□□ -1.87
Cstf1Q99LC2 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cstf1Q99LC2 Gm17204-201ENSMUST00000167936 478 ntBASIC3.36□□□□□ -1.87
Cstf1Q99LC2 Gm21827-201ENSMUST00000178247 423 ntBASIC3.36□□□□□ -1.87
Cstf1Q99LC2 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Cstf1Q99LC2 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Cstf1Q99LC2 Gm37543-201ENSMUST00000192443 1031 ntBASIC3.36□□□□□ -1.87
Cstf1Q99LC2 Gm20162-201ENSMUST00000193629 871 ntBASIC3.36□□□□□ -1.87
Cstf1Q99LC2 Gm43675-201ENSMUST00000199468 1184 ntBASIC3.36□□□□□ -1.87
Cstf1Q99LC2 Gm35857-201ENSMUST00000212739 178 ntBASIC3.36□□□□□ -1.87
Cstf1Q99LC2 Gm4052-201ENSMUST00000220890 451 ntBASIC3.36□□□□□ -1.87
Cstf1Q99LC2 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.36□□□□□ -1.87
Cstf1Q99LC2 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.36□□□□□ -1.87
Cstf1Q99LC2 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.36□□□□□ -1.87
Cstf1Q99LC2 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Cstf1Q99LC2 Gm26203-201ENSMUST00000082911 114 ntBASIC3.36□□□□□ -1.87
Cstf1Q99LC2 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC3.36□□□□□ -1.87
Cstf1Q99LC2 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cstf1Q99LC2 Gm10242-201ENSMUST00000090064 330 ntBASIC3.36□□□□□ -1.87
Cstf1Q99LC2 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cstf1Q99LC2 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Cstf1Q99LC2 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Cstf1Q99LC2 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.36□□□□□ -1.87
Cstf1Q99LC2 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.35□□□□□ -1.87
Cstf1Q99LC2 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
Cstf1Q99LC2 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Cstf1Q99LC2 Gm22750-201ENSMUST00000102076 103 ntBASIC3.35□□□□□ -1.87
Cstf1Q99LC2 Gm24951-201ENSMUST00000102182 109 ntBASIC3.35□□□□□ -1.87
Cstf1Q99LC2 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Cstf1Q99LC2 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Cstf1Q99LC2 Gm14939-201ENSMUST00000120347 680 ntBASIC3.35□□□□□ -1.87
Cstf1Q99LC2 Gm6591-201ENSMUST00000121063 434 ntBASIC3.35□□□□□ -1.87
Cstf1Q99LC2 Gm15244-201ENSMUST00000121122 130 ntBASIC3.35□□□□□ -1.87
Cstf1Q99LC2 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Cstf1Q99LC2 Gm24111-201ENSMUST00000175491 97 ntBASIC3.35□□□□□ -1.87
Cstf1Q99LC2 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Cstf1Q99LC2 Gm27783-201ENSMUST00000183534 105 ntBASIC3.35□□□□□ -1.87
Cstf1Q99LC2 Gm27522-201ENSMUST00000183949 230 ntBASIC3.35□□□□□ -1.87
Cstf1Q99LC2 Gm27477-201ENSMUST00000184649 143 ntBASIC3.35□□□□□ -1.87
Cstf1Q99LC2 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.35□□□□□ -1.87
Cstf1Q99LC2 Gm28155-201ENSMUST00000191066 151 ntBASIC3.35□□□□□ -1.87
Cstf1Q99LC2 Gm43227-201ENSMUST00000202239 677 ntBASIC3.35□□□□□ -1.87
Cstf1Q99LC2 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Cstf1Q99LC2 Gm44966-201ENSMUST00000208096 157 ntBASIC3.35□□□□□ -1.87
Cstf1Q99LC2 Gm45513-201ENSMUST00000210228 376 ntBASIC3.35□□□□□ -1.87
Cstf1Q99LC2 Gm18585-201ENSMUST00000215197 556 ntBASIC3.35□□□□□ -1.87
Cstf1Q99LC2 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.35□□□□□ -1.87
Cstf1Q99LC2 Gm30738-201ENSMUST00000221346 502 ntBASIC3.35□□□□□ -1.87
Cstf1Q99LC2 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Cstf1Q99LC2 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Cstf1Q99LC2 Gm23460-201ENSMUST00000083258 109 ntBASIC3.35□□□□□ -1.87
Cstf1Q99LC2 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Cstf1Q99LC2 AC154552.6-201ENSMUST00000221365 1342 ntBASIC3.35□□□□□ -1.87
Cstf1Q99LC2 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Cstf1Q99LC2 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Cstf1Q99LC2 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Cstf1Q99LC2 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Cstf1Q99LC2 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Cstf1Q99LC2 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC3.34□□□□□ -1.87
Cstf1Q99LC2 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.34□□□□□ -1.87
Cstf1Q99LC2 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC3.34□□□□□ -1.87
Cstf1Q99LC2 Gm15159-201ENSMUST00000117062 764 ntBASIC3.34□□□□□ -1.87
Cstf1Q99LC2 Gm15087-201ENSMUST00000117465 1172 ntBASIC3.34□□□□□ -1.87
Cstf1Q99LC2 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Cstf1Q99LC2 Gm11830-201ENSMUST00000120175 561 ntBASIC3.34□□□□□ -1.87
Cstf1Q99LC2 Gm15147-201ENSMUST00000122263 483 ntBASIC3.34□□□□□ -1.87
Cstf1Q99LC2 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Cstf1Q99LC2 Gm17164-201ENSMUST00000169013 506 ntBASIC3.34□□□□□ -1.87
Cstf1Q99LC2 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC3.34□□□□□ -1.87
Cstf1Q99LC2 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC3.34□□□□□ -1.87
Cstf1Q99LC2 Gm44256-201ENSMUST00000203304 335 ntBASIC3.34□□□□□ -1.87
Cstf1Q99LC2 Gm44399-201ENSMUST00000205043 226 ntBASIC3.34□□□□□ -1.87
Cstf1Q99LC2 Gm5322-201ENSMUST00000206142 699 ntBASIC3.34□□□□□ -1.87
Cstf1Q99LC2 Gm18410-201ENSMUST00000207199 577 ntBASIC3.34□□□□□ -1.87
Cstf1Q99LC2 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.34□□□□□ -1.87
Cstf1Q99LC2 Gm19987-201ENSMUST00000216339 499 ntBASIC3.34□□□□□ -1.87
Cstf1Q99LC2 AC132384.9-201ENSMUST00000218085 277 ntBASIC3.34□□□□□ -1.87
Cstf1Q99LC2 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.34□□□□□ -1.87
Cstf1Q99LC2 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 129.8 ms