Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Pcdha3Q91Y16 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Pcdha3Q91Y16 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Pcdha3Q91Y16 Gm44625-201ENSMUST00000207838 1561 ntBASIC4.27□□□□□ -1.73
Pcdha3Q91Y16 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Pcdha3Q91Y16 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC4.27□□□□□ -1.73
Pcdha3Q91Y16 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Pcdha3Q91Y16 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Pcdha3Q91Y16 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm8666-201ENSMUST00000117517 292 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm8757-201ENSMUST00000119660 372 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm12691-201ENSMUST00000120186 456 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm9003-201ENSMUST00000121810 482 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm12819-201ENSMUST00000122223 629 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm22613-201ENSMUST00000122679 292 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm25965-201ENSMUST00000157170 93 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm23957-201ENSMUST00000157209 90 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm16101-201ENSMUST00000160695 430 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm16303-201ENSMUST00000161498 390 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm19203-201ENSMUST00000174049 939 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm17946-201ENSMUST00000186856 538 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm18291-201ENSMUST00000190791 301 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm8790-201ENSMUST00000194108 322 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm43601-201ENSMUST00000196294 945 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm5034-201ENSMUST00000199115 634 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm44465-201ENSMUST00000199536 114 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm29754-201ENSMUST00000206269 358 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 AC162931.1-201ENSMUST00000214184 267 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 AC117588.3-201ENSMUST00000228517 325 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm26439-201ENSMUST00000082592 106 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm24765-201ENSMUST00000083691 103 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm18913-201ENSMUST00000204311 1789 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm43374-201ENSMUST00000202498 2391 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm7905-201ENSMUST00000119933 1386 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm6207-201ENSMUST00000120075 1386 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm6228-201ENSMUST00000178856 1386 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm6221-201ENSMUST00000180064 1386 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Gm44435-201ENSMUST00000204379 4119 ntBASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Pcdha3Q91Y16 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 AC121997.2-203ENSMUST00000228613 4192 ntBASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Gm23273-201ENSMUST00000104058 135 ntBASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Gm16431-201ENSMUST00000117454 431 ntBASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Gm12878-201ENSMUST00000118744 332 ntBASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Gm14352-201ENSMUST00000119250 449 ntBASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Gm14875-201ENSMUST00000120881 319 ntBASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Gm6591-201ENSMUST00000121063 434 ntBASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Gm23118-201ENSMUST00000122657 187 ntBASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Gm11281-201ENSMUST00000141391 576 ntBASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Gm19898-201ENSMUST00000177490 251 ntBASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Mir6933-201ENSMUST00000184982 81 ntBASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Gm28404-201ENSMUST00000190242 453 ntBASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Gm20811-201ENSMUST00000190500 553 ntBASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Gm44354-201ENSMUST00000196017 143 ntBASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Gm18971-201ENSMUST00000197240 374 ntBASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Igkv11-114-201ENSMUST00000200013 346 ntBASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Gm7468-201ENSMUST00000203900 652 ntBASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Gm45146-201ENSMUST00000207108 221 ntBASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Gm7624-201ENSMUST00000209702 435 ntBASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Gm45523-201ENSMUST00000210712 799 ntBASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Pcdha3Q91Y16 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms