Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.25□□□□□ -2.05
Nup35Q8R4R6 Gm23326-201ENSMUST00000157419 105 ntBASIC2.25□□□□□ -2.05
Nup35Q8R4R6 Gm24998-201ENSMUST00000157908 89 ntBASIC2.25□□□□□ -2.05
Nup35Q8R4R6 Gm15946-201ENSMUST00000160654 423 ntBASIC2.25□□□□□ -2.05
Nup35Q8R4R6 Gm22858-201ENSMUST00000174972 76 ntBASIC2.25□□□□□ -2.05
Nup35Q8R4R6 Mir5136-201ENSMUST00000175573 76 ntBASIC2.25□□□□□ -2.05
Nup35Q8R4R6 Gm5473-201ENSMUST00000179326 642 ntBASIC2.25□□□□□ -2.05
Nup35Q8R4R6 Gm27608-201ENSMUST00000184822 162 ntBASIC2.25□□□□□ -2.05
Nup35Q8R4R6 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC2.25□□□□□ -2.05
Nup35Q8R4R6 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.25□□□□□ -2.05
Nup35Q8R4R6 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.25□□□□□ -2.05
Nup35Q8R4R6 Gm43967-201ENSMUST00000203787 301 ntBASIC2.25□□□□□ -2.05
Nup35Q8R4R6 Gm19253-201ENSMUST00000204279 307 ntBASIC2.25□□□□□ -2.05
Nup35Q8R4R6 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC2.25□□□□□ -2.05
Nup35Q8R4R6 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Nup35Q8R4R6 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC2.25□□□□□ -2.05
Nup35Q8R4R6 Gm45742-201ENSMUST00000212400 433 ntBASIC2.25□□□□□ -2.05
Nup35Q8R4R6 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
Nup35Q8R4R6 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC2.25□□□□□ -2.05
Nup35Q8R4R6 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
Nup35Q8R4R6 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC2.25□□□□□ -2.05
Nup35Q8R4R6 CT025525.1-201ENSMUST00000226325 1054 ntBASIC2.25□□□□□ -2.05
Nup35Q8R4R6 Vmn1r89-206ENSMUST00000227319 985 ntBASIC2.25□□□□□ -2.05
Nup35Q8R4R6 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.25□□□□□ -2.05
Nup35Q8R4R6 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Nup35Q8R4R6 Gm37387-201ENSMUST00000192201 1806 ntBASIC2.25□□□□□ -2.05
Nup35Q8R4R6 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.25□□□□□ -2.05
Nup35Q8R4R6 Gm42870-201ENSMUST00000199355 3470 ntBASIC2.25□□□□□ -2.05
Nup35Q8R4R6 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Nup35Q8R4R6 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm28359-201ENSMUST00000187470 1322 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 AC154552.6-201ENSMUST00000221365 1342 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm24118-201ENSMUST00000103972 126 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm23609-201ENSMUST00000104542 127 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm2066-201ENSMUST00000118046 389 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm2318-201ENSMUST00000119623 639 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm11693-201ENSMUST00000119625 565 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm2005-201ENSMUST00000120759 542 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Mup-ps20-201ENSMUST00000121132 389 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm14162-201ENSMUST00000121985 601 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm23599-201ENSMUST00000157261 251 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm19898-201ENSMUST00000177490 251 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm7438-201ENSMUST00000177664 639 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm7408-201ENSMUST00000178014 639 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm7386-201ENSMUST00000178020 639 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm3657-201ENSMUST00000178170 639 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm7415-201ENSMUST00000178205 639 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm7398-201ENSMUST00000178589 639 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm7391-201ENSMUST00000178680 639 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm7375-201ENSMUST00000179232 639 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm3681-201ENSMUST00000179940 639 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm6113-201ENSMUST00000180319 639 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm26915-201ENSMUST00000183080 748 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm18727-201ENSMUST00000185981 553 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm29576-201ENSMUST00000188020 678 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm28354-201ENSMUST00000190904 678 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm44964-201ENSMUST00000207011 273 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC2.24□□□□□ -2.05
Nup35Q8R4R6 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC2.24□□□□□ -2.05
Nup35Q8R4R6 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Nup35Q8R4R6 AC154224.1-201ENSMUST00000224367 403 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 AC154594.1-201ENSMUST00000225171 1273 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm26458-201ENSMUST00000082832 128 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Gm11284-201ENSMUST00000121910 1887 ntBASIC2.24□□□□□ -2.05
Nup35Q8R4R6 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Nup35Q8R4R6 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.23□□□□□ -2.05
Nup35Q8R4R6 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC2.23□□□□□ -2.05
Nup35Q8R4R6 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Nup35Q8R4R6 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Nup35Q8R4R6 Gm25727-201ENSMUST00000104522 131 ntBASIC2.23□□□□□ -2.05
Nup35Q8R4R6 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Nup35Q8R4R6 Gm14656-201ENSMUST00000120342 502 ntBASIC2.23□□□□□ -2.05
Nup35Q8R4R6 Gm22789-201ENSMUST00000157884 130 ntBASIC2.23□□□□□ -2.05
Nup35Q8R4R6 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Nup35Q8R4R6 Gm22853-201ENSMUST00000174974 131 ntBASIC2.23□□□□□ -2.05
Nup35Q8R4R6 Mir5710-201ENSMUST00000176884 69 ntBASIC2.23□□□□□ -2.05
Nup35Q8R4R6 Gm24520-201ENSMUST00000179510 110 ntBASIC2.23□□□□□ -2.05
Nup35Q8R4R6 Gm27921-201ENSMUST00000183968 108 ntBASIC2.23□□□□□ -2.05
Nup35Q8R4R6 Gm29658-201ENSMUST00000185404 230 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms