Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CopaQ8CIE6 Gm24951-201ENSMUST00000102182 109 ntBASIC4.22□□□□□ -1.73
CopaQ8CIE6 Gm12433-201ENSMUST00000119659 255 ntBASIC4.22□□□□□ -1.73
CopaQ8CIE6 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.22□□□□□ -1.73
CopaQ8CIE6 Gm14766-201ENSMUST00000121689 367 ntBASIC4.22□□□□□ -1.73
CopaQ8CIE6 Gm23463-201ENSMUST00000122468 99 ntBASIC4.22□□□□□ -1.73
CopaQ8CIE6 Gm25666-201ENSMUST00000157702 107 ntBASIC4.22□□□□□ -1.73
CopaQ8CIE6 Gm25386-201ENSMUST00000157814 288 ntBASIC4.22□□□□□ -1.73
CopaQ8CIE6 Gm25365-201ENSMUST00000158852 121 ntBASIC4.22□□□□□ -1.73
CopaQ8CIE6 Gm23473-201ENSMUST00000158883 116 ntBASIC4.22□□□□□ -1.73
CopaQ8CIE6 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CopaQ8CIE6 Gm25194-201ENSMUST00000177987 79 ntBASIC4.22□□□□□ -1.73
CopaQ8CIE6 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CopaQ8CIE6 Gm29545-201ENSMUST00000188878 694 ntBASIC4.22□□□□□ -1.73
CopaQ8CIE6 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC4.22□□□□□ -1.73
CopaQ8CIE6 Gm9236-201ENSMUST00000196892 587 ntBASIC4.22□□□□□ -1.73
CopaQ8CIE6 Gm43814-201ENSMUST00000197851 413 ntBASIC4.22□□□□□ -1.73
CopaQ8CIE6 Gm5551-201ENSMUST00000199720 690 ntBASIC4.22□□□□□ -1.73
CopaQ8CIE6 Gm7041-201ENSMUST00000201227 524 ntBASIC4.22□□□□□ -1.73
CopaQ8CIE6 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC4.22□□□□□ -1.73
CopaQ8CIE6 Gm44765-201ENSMUST00000206927 601 ntBASIC4.22□□□□□ -1.73
CopaQ8CIE6 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC4.22□□□□□ -1.73
CopaQ8CIE6 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CopaQ8CIE6 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC4.22□□□□□ -1.73
CopaQ8CIE6 Gm3442-201ENSMUST00000216808 710 ntBASIC4.22□□□□□ -1.73
CopaQ8CIE6 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CopaQ8CIE6 AC109214.2-201ENSMUST00000220089 358 ntBASIC4.22□□□□□ -1.73
CopaQ8CIE6 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CopaQ8CIE6 AC167977.1-201ENSMUST00000221384 234 ntBASIC4.22□□□□□ -1.73
CopaQ8CIE6 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC4.22□□□□□ -1.73
CopaQ8CIE6 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.22□□□□□ -1.73
CopaQ8CIE6 AC122448.1-201ENSMUST00000226317 772 ntBASIC4.22□□□□□ -1.73
CopaQ8CIE6 n-R5s37-201ENSMUST00000082533 118 ntBASIC4.22□□□□□ -1.73
CopaQ8CIE6 n-R5s50-201ENSMUST00000083168 111 ntBASIC4.22□□□□□ -1.73
CopaQ8CIE6 Gm26121-201ENSMUST00000083364 162 ntBASIC4.22□□□□□ -1.73
CopaQ8CIE6 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CopaQ8CIE6 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CopaQ8CIE6 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CopaQ8CIE6 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CopaQ8CIE6 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CopaQ8CIE6 Gm4855-201ENSMUST00000192270 1967 ntBASIC4.22□□□□□ -1.73
CopaQ8CIE6 Gm38091-201ENSMUST00000192418 3871 ntBASIC4.21□□□□□ -1.73
CopaQ8CIE6 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.73
CopaQ8CIE6 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.21□□□□□ -1.73
CopaQ8CIE6 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CopaQ8CIE6 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CopaQ8CIE6 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CopaQ8CIE6 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.21□□□□□ -1.74
CopaQ8CIE6 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.21□□□□□ -1.74
CopaQ8CIE6 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CopaQ8CIE6 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CopaQ8CIE6 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC4.21□□□□□ -1.74
CopaQ8CIE6 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC4.21□□□□□ -1.74
CopaQ8CIE6 Gm11876-201ENSMUST00000120002 269 ntBASIC4.21□□□□□ -1.74
CopaQ8CIE6 Gm5060-201ENSMUST00000120072 599 ntBASIC4.21□□□□□ -1.74
CopaQ8CIE6 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC4.21□□□□□ -1.74
CopaQ8CIE6 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC4.21□□□□□ -1.74
CopaQ8CIE6 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC4.21□□□□□ -1.74
CopaQ8CIE6 Gm5379-201ENSMUST00000120973 826 ntBASIC4.21□□□□□ -1.74
CopaQ8CIE6 Gm14411-201ENSMUST00000121798 914 ntBASIC4.21□□□□□ -1.74
CopaQ8CIE6 Gm8200-201ENSMUST00000122390 222 ntBASIC4.21□□□□□ -1.74
CopaQ8CIE6 Gm22204-201ENSMUST00000122654 327 ntBASIC4.21□□□□□ -1.74
CopaQ8CIE6 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CopaQ8CIE6 Gm25706-201ENSMUST00000157828 247 ntBASIC4.21□□□□□ -1.74
CopaQ8CIE6 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC4.21□□□□□ -1.74
CopaQ8CIE6 Mir496b-201ENSMUST00000184935 113 ntBASIC4.21□□□□□ -1.74
CopaQ8CIE6 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC4.21□□□□□ -1.74
CopaQ8CIE6 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CopaQ8CIE6 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC4.21□□□□□ -1.74
CopaQ8CIE6 Gm8790-201ENSMUST00000194108 322 ntBASIC4.21□□□□□ -1.74
CopaQ8CIE6 Gm7449-201ENSMUST00000194393 663 ntBASIC4.21□□□□□ -1.74
CopaQ8CIE6 Gm43652-201ENSMUST00000196219 675 ntBASIC4.21□□□□□ -1.74
CopaQ8CIE6 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CopaQ8CIE6 Gm43550-201ENSMUST00000200597 303 ntBASIC4.21□□□□□ -1.74
CopaQ8CIE6 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CopaQ8CIE6 Gm45590-201ENSMUST00000209715 262 ntBASIC4.21□□□□□ -1.74
CopaQ8CIE6 Gm45316-201ENSMUST00000210128 162 ntBASIC4.21□□□□□ -1.74
CopaQ8CIE6 AC153852.1-201ENSMUST00000217881 567 ntBASIC4.21□□□□□ -1.74
CopaQ8CIE6 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC4.21□□□□□ -1.74
CopaQ8CIE6 AC174797.3-202ENSMUST00000224578 587 ntBASIC4.21□□□□□ -1.74
CopaQ8CIE6 AC166369.1-201ENSMUST00000228126 351 ntBASIC4.21□□□□□ -1.74
CopaQ8CIE6 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CopaQ8CIE6 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CopaQ8CIE6 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CopaQ8CIE6 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CopaQ8CIE6 Gm26206-201ENSMUST00000082908 110 ntBASIC4.21□□□□□ -1.74
CopaQ8CIE6 Gm26165-201ENSMUST00000083791 138 ntBASIC4.21□□□□□ -1.74
CopaQ8CIE6 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC4.21□□□□□ -1.74
CopaQ8CIE6 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.21□□□□□ -1.74
CopaQ8CIE6 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CopaQ8CIE6 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.21□□□□□ -1.74
CopaQ8CIE6 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
CopaQ8CIE6 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
CopaQ8CIE6 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CopaQ8CIE6 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.2□□□□□ -1.74
CopaQ8CIE6 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CopaQ8CIE6 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CopaQ8CIE6 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CopaQ8CIE6 Gm25088-201ENSMUST00000101803 79 ntBASIC4.2□□□□□ -1.74
CopaQ8CIE6 Gm23256-201ENSMUST00000102235 110 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms