Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Ccdc28bQ8CEG5 Gm28495-201ENSMUST00000188452 315 ntBASIC3.47□□□□□ -1.85
Ccdc28bQ8CEG5 Gm28232-201ENSMUST00000188683 315 ntBASIC3.47□□□□□ -1.85
Ccdc28bQ8CEG5 Gm28481-201ENSMUST00000189231 315 ntBASIC3.47□□□□□ -1.85
Ccdc28bQ8CEG5 Gm29059-201ENSMUST00000191534 315 ntBASIC3.47□□□□□ -1.85
Ccdc28bQ8CEG5 Gm37765-201ENSMUST00000192395 315 ntBASIC3.47□□□□□ -1.85
Ccdc28bQ8CEG5 Gm37237-201ENSMUST00000192893 315 ntBASIC3.47□□□□□ -1.85
Ccdc28bQ8CEG5 Gm36968-201ENSMUST00000193737 315 ntBASIC3.47□□□□□ -1.85
Ccdc28bQ8CEG5 Gm38290-201ENSMUST00000195238 315 ntBASIC3.47□□□□□ -1.85
Ccdc28bQ8CEG5 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.47□□□□□ -1.85
Ccdc28bQ8CEG5 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC3.47□□□□□ -1.85
Ccdc28bQ8CEG5 AC069561.3-201ENSMUST00000217321 114 ntBASIC3.47□□□□□ -1.85
Ccdc28bQ8CEG5 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC3.47□□□□□ -1.85
Ccdc28bQ8CEG5 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Ccdc28bQ8CEG5 AC158955.1-201ENSMUST00000227140 385 ntBASIC3.47□□□□□ -1.85
Ccdc28bQ8CEG5 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Ccdc28bQ8CEG5 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Ccdc28bQ8CEG5 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.47□□□□□ -1.85
Ccdc28bQ8CEG5 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
Ccdc28bQ8CEG5 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Ccdc28bQ8CEG5 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Ccdc28bQ8CEG5 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.47□□□□□ -1.85
Ccdc28bQ8CEG5 Gm44708-201ENSMUST00000205580 2237 ntBASIC3.47□□□□□ -1.85
Ccdc28bQ8CEG5 Gm42483-201ENSMUST00000197556 1742 ntBASIC3.47□□□□□ -1.85
Ccdc28bQ8CEG5 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
Ccdc28bQ8CEG5 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
Ccdc28bQ8CEG5 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Gm19074-201ENSMUST00000218915 1429 ntBASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Gm22591-201ENSMUST00000104243 106 ntBASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Gm22091-201ENSMUST00000116908 127 ntBASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Gm6429-201ENSMUST00000117144 475 ntBASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Gm11943-201ENSMUST00000119473 327 ntBASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Gm12994-201ENSMUST00000119601 447 ntBASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Gm13720-201ENSMUST00000120741 196 ntBASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Gm16250-201ENSMUST00000148974 256 ntBASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Gm24503-201ENSMUST00000158454 135 ntBASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Mir669a-7-201ENSMUST00000180364 87 ntBASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Mir6345-201ENSMUST00000184286 128 ntBASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Gm37431-201ENSMUST00000195102 111 ntBASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Mir669a-6-201ENSMUST00000196127 87 ntBASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Mir669a-12-201ENSMUST00000197274 87 ntBASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Mir669a-5-201ENSMUST00000197439 87 ntBASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Mir669a-10-201ENSMUST00000197745 87 ntBASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Mir669a-11-201ENSMUST00000197952 87 ntBASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Mir669a-4-201ENSMUST00000198665 87 ntBASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Gm43675-201ENSMUST00000199468 1184 ntBASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Mir669a-9-201ENSMUST00000200087 87 ntBASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Mir669a-8-201ENSMUST00000200268 87 ntBASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 AC112274.2-201ENSMUST00000218436 170 ntBASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Gm7119-201ENSMUST00000221345 695 ntBASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 AC121960.3-201ENSMUST00000227077 623 ntBASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 AC125523.1-201ENSMUST00000228018 934 ntBASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.46□□□□□ -1.86
Ccdc28bQ8CEG5 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Gm26002-201ENSMUST00000101915 107 ntBASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Gm15108-201ENSMUST00000116160 803 ntBASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Gm15613-201ENSMUST00000118396 326 ntBASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Gm11843-201ENSMUST00000118984 425 ntBASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Gm6587-201ENSMUST00000120219 613 ntBASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Gm12317-201ENSMUST00000122307 319 ntBASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Gm25052-201ENSMUST00000122661 158 ntBASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Gm23782-201ENSMUST00000157939 120 ntBASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Gm25520-201ENSMUST00000158389 118 ntBASIC3.45□□□□□ -1.86
Ccdc28bQ8CEG5 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms