Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Lrif1Q8CDD9 Gm29365-201ENSMUST00000189461 699 ntBASIC3.24□□□□□ -1.89
Lrif1Q8CDD9 Gm6680-201ENSMUST00000192789 950 ntBASIC3.24□□□□□ -1.89
Lrif1Q8CDD9 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC3.24□□□□□ -1.89
Lrif1Q8CDD9 Gm37290-201ENSMUST00000195775 339 ntBASIC3.24□□□□□ -1.89
Lrif1Q8CDD9 Gm8209-201ENSMUST00000206386 553 ntBASIC3.24□□□□□ -1.89
Lrif1Q8CDD9 Gm44615-201ENSMUST00000206548 358 ntBASIC3.24□□□□□ -1.89
Lrif1Q8CDD9 Gm44513-201ENSMUST00000206811 439 ntBASIC3.24□□□□□ -1.89
Lrif1Q8CDD9 CT573422.1-201ENSMUST00000216655 405 ntBASIC3.24□□□□□ -1.89
Lrif1Q8CDD9 AC164629.1-201ENSMUST00000220250 1113 ntBASIC3.24□□□□□ -1.89
Lrif1Q8CDD9 CT571268.1-201ENSMUST00000222320 407 ntBASIC3.24□□□□□ -1.89
Lrif1Q8CDD9 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Lrif1Q8CDD9 AC121960.3-201ENSMUST00000227077 623 ntBASIC3.24□□□□□ -1.89
Lrif1Q8CDD9 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.24□□□□□ -1.89
Lrif1Q8CDD9 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Lrif1Q8CDD9 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.24□□□□□ -1.89
Lrif1Q8CDD9 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Lrif1Q8CDD9 Gm22293-201ENSMUST00000083314 109 ntBASIC3.24□□□□□ -1.89
Lrif1Q8CDD9 Gm25630-201ENSMUST00000084000 162 ntBASIC3.24□□□□□ -1.89
Lrif1Q8CDD9 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Lrif1Q8CDD9 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Lrif1Q8CDD9 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
Lrif1Q8CDD9 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.24□□□□□ -1.89
Lrif1Q8CDD9 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Lrif1Q8CDD9 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Lrif1Q8CDD9 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm14931-201ENSMUST00000111079 253 ntBASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm13678-201ENSMUST00000118926 340 ntBASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm15103-201ENSMUST00000119893 871 ntBASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm6591-201ENSMUST00000121063 434 ntBASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm6079-201ENSMUST00000121356 404 ntBASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm15157-201ENSMUST00000121852 702 ntBASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm24061-201ENSMUST00000157489 120 ntBASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm25835-201ENSMUST00000158917 144 ntBASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm36943-201ENSMUST00000194422 282 ntBASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm34091-201ENSMUST00000200875 604 ntBASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm44634-201ENSMUST00000206119 152 ntBASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Zmym2-202ENSMUST00000223669 1281 ntBASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 AC159242.1-201ENSMUST00000225832 194 ntBASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm2710-201ENSMUST00000073196 603 ntBASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Mir350-201ENSMUST00000083639 99 ntBASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm8074-201ENSMUST00000095071 252 ntBASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Gm44438-201ENSMUST00000204388 3236 ntBASIC3.23□□□□□ -1.89
Lrif1Q8CDD9 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Lrif1Q8CDD9 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.22□□□□□ -1.89
Lrif1Q8CDD9 Gm37999-201ENSMUST00000195178 1809 ntBASIC3.22□□□□□ -1.89
Lrif1Q8CDD9 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.22□□□□□ -1.89
Lrif1Q8CDD9 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Lrif1Q8CDD9 Gm24951-201ENSMUST00000102182 109 ntBASIC3.22□□□□□ -1.89
Lrif1Q8CDD9 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Lrif1Q8CDD9 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Lrif1Q8CDD9 Gm23667-201ENSMUST00000157466 120 ntBASIC3.22□□□□□ -1.89
Lrif1Q8CDD9 Gm25519-201ENSMUST00000158392 127 ntBASIC3.22□□□□□ -1.89
Lrif1Q8CDD9 Gm15946-201ENSMUST00000160654 423 ntBASIC3.22□□□□□ -1.89
Lrif1Q8CDD9 Gm17061-201ENSMUST00000163167 499 ntBASIC3.22□□□□□ -1.89
Lrif1Q8CDD9 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
Lrif1Q8CDD9 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Lrif1Q8CDD9 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Lrif1Q8CDD9 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC3.22□□□□□ -1.89
Lrif1Q8CDD9 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Lrif1Q8CDD9 Mup-ps7-201ENSMUST00000178292 545 ntBASIC3.22□□□□□ -1.89
Lrif1Q8CDD9 Mup-ps8-201ENSMUST00000178663 545 ntBASIC3.22□□□□□ -1.89
Lrif1Q8CDD9 Mup-ps9-201ENSMUST00000178847 545 ntBASIC3.22□□□□□ -1.89
Lrif1Q8CDD9 Mup-ps6-201ENSMUST00000179564 545 ntBASIC3.22□□□□□ -1.89
Lrif1Q8CDD9 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Lrif1Q8CDD9 Gm37828-201ENSMUST00000192496 432 ntBASIC3.22□□□□□ -1.89
Lrif1Q8CDD9 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms