Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm11784-201ENSMUST00000118568 474 ntBASIC5.6□□□□□ -1.51
Usp40Q8BWR4 Gm12311-201ENSMUST00000118803 374 ntBASIC5.6□□□□□ -1.51
Usp40Q8BWR4 Gm11645-201ENSMUST00000121589 649 ntBASIC5.6□□□□□ -1.51
Usp40Q8BWR4 Gm24505-201ENSMUST00000157682 126 ntBASIC5.6□□□□□ -1.51
Usp40Q8BWR4 Gm24998-201ENSMUST00000157908 89 ntBASIC5.6□□□□□ -1.51
Usp40Q8BWR4 Gm22839-201ENSMUST00000158436 304 ntBASIC5.6□□□□□ -1.51
Usp40Q8BWR4 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC5.6□□□□□ -1.51
Usp40Q8BWR4 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC5.6□□□□□ -1.51
Usp40Q8BWR4 Gm8532-201ENSMUST00000179174 461 ntBASIC5.6□□□□□ -1.51
Usp40Q8BWR4 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Usp40Q8BWR4 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.6□□□□□ -1.51
Usp40Q8BWR4 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC5.6□□□□□ -1.51
Usp40Q8BWR4 Gm45063-201ENSMUST00000203726 472 ntBASIC5.6□□□□□ -1.51
Usp40Q8BWR4 AC122225.1-201ENSMUST00000215641 369 ntBASIC5.6□□□□□ -1.51
Usp40Q8BWR4 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC5.6□□□□□ -1.51
Usp40Q8BWR4 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.6□□□□□ -1.51
Usp40Q8BWR4 AC102291.2-201ENSMUST00000228083 367 ntBASIC5.6□□□□□ -1.51
Usp40Q8BWR4 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Usp40Q8BWR4 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Usp40Q8BWR4 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC5.6□□□□□ -1.51
Usp40Q8BWR4 AC152162.1-201ENSMUST00000225910 2917 ntBASIC5.6□□□□□ -1.51
Usp40Q8BWR4 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Usp40Q8BWR4 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.59□□□□□ -1.51
Usp40Q8BWR4 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Usp40Q8BWR4 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Usp40Q8BWR4 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
Usp40Q8BWR4 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Usp40Q8BWR4 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Usp40Q8BWR4 Gm24581-201ENSMUST00000103962 133 ntBASIC5.59□□□□□ -1.51
Usp40Q8BWR4 Gm11794-201ENSMUST00000119446 237 ntBASIC5.59□□□□□ -1.51
Usp40Q8BWR4 Gm7219-201ENSMUST00000119619 297 ntBASIC5.59□□□□□ -1.51
Usp40Q8BWR4 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC5.59□□□□□ -1.51
Usp40Q8BWR4 Gm22968-201ENSMUST00000157955 118 ntBASIC5.59□□□□□ -1.51
Usp40Q8BWR4 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Usp40Q8BWR4 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Usp40Q8BWR4 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC5.59□□□□□ -1.51
Usp40Q8BWR4 Gm10292-201ENSMUST00000183142 581 ntBASIC5.59□□□□□ -1.51
Usp40Q8BWR4 Gm27402-201ENSMUST00000183890 120 ntBASIC5.59□□□□□ -1.51
Usp40Q8BWR4 Gm5983-201ENSMUST00000197739 770 ntBASIC5.59□□□□□ -1.51
Usp40Q8BWR4 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Usp40Q8BWR4 Gm45438-201ENSMUST00000210242 564 ntBASIC5.59□□□□□ -1.51
Usp40Q8BWR4 AC124433.2-201ENSMUST00000223867 291 ntBASIC5.59□□□□□ -1.51
Usp40Q8BWR4 AC187103.4-202ENSMUST00000225091 230 ntBASIC5.59□□□□□ -1.51
Usp40Q8BWR4 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Usp40Q8BWR4 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Usp40Q8BWR4 Gm25200-201ENSMUST00000083094 130 ntBASIC5.59□□□□□ -1.51
Usp40Q8BWR4 Gm3867-201ENSMUST00000086108 279 ntBASIC5.59□□□□□ -1.51
Usp40Q8BWR4 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Usp40Q8BWR4 Gm42729-201ENSMUST00000201770 2930 ntBASIC5.58□□□□□ -1.52
Usp40Q8BWR4 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Usp40Q8BWR4 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Usp40Q8BWR4 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Usp40Q8BWR4 Gm45577-201ENSMUST00000210206 2287 ntBASIC5.58□□□□□ -1.52
Usp40Q8BWR4 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC5.58□□□□□ -1.52
Usp40Q8BWR4 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC5.58□□□□□ -1.52
Usp40Q8BWR4 Gm12891-201ENSMUST00000119358 240 ntBASIC5.58□□□□□ -1.52
Usp40Q8BWR4 Gm11719-201ENSMUST00000119399 351 ntBASIC5.58□□□□□ -1.52
Usp40Q8BWR4 Gm15364-201ENSMUST00000119618 585 ntBASIC5.58□□□□□ -1.52
Usp40Q8BWR4 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC5.58□□□□□ -1.52
Usp40Q8BWR4 Gm22889-201ENSMUST00000158639 58 ntBASIC5.58□□□□□ -1.52
Usp40Q8BWR4 Gm16101-201ENSMUST00000160695 430 ntBASIC5.58□□□□□ -1.52
Usp40Q8BWR4 Gm20656-201ENSMUST00000176925 518 ntBASIC5.58□□□□□ -1.52
Usp40Q8BWR4 Mir713-201ENSMUST00000178651 108 ntBASIC5.58□□□□□ -1.52
Usp40Q8BWR4 Gm17781-201ENSMUST00000195232 649 ntBASIC5.58□□□□□ -1.52
Usp40Q8BWR4 Gm43405-201ENSMUST00000198642 337 ntBASIC5.58□□□□□ -1.52
Usp40Q8BWR4 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC5.58□□□□□ -1.52
Usp40Q8BWR4 Gm18507-201ENSMUST00000218855 525 ntBASIC5.58□□□□□ -1.52
Usp40Q8BWR4 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC5.58□□□□□ -1.52
Usp40Q8BWR4 AC154358.1-201ENSMUST00000224871 218 ntBASIC5.58□□□□□ -1.52
Usp40Q8BWR4 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Usp40Q8BWR4 Gm24042-201ENSMUST00000083114 103 ntBASIC5.58□□□□□ -1.52
Usp40Q8BWR4 Mir325-201ENSMUST00000083491 98 ntBASIC5.58□□□□□ -1.52
Usp40Q8BWR4 Gm25859-201ENSMUST00000083710 91 ntBASIC5.58□□□□□ -1.52
Usp40Q8BWR4 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC5.58□□□□□ -1.52
Usp40Q8BWR4 Gm22365-201ENSMUST00000093750 117 ntBASIC5.58□□□□□ -1.52
Usp40Q8BWR4 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Usp40Q8BWR4 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Usp40Q8BWR4 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC5.58□□□□□ -1.52
Usp40Q8BWR4 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Usp40Q8BWR4 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
Usp40Q8BWR4 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Usp40Q8BWR4 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Usp40Q8BWR4 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Usp40Q8BWR4 AC167360.1-201ENSMUST00000222596 2494 ntBASIC5.57□□□□□ -1.52
Usp40Q8BWR4 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Usp40Q8BWR4 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
Usp40Q8BWR4 Gm43326-201ENSMUST00000198459 1638 ntBASIC5.57□□□□□ -1.52
Usp40Q8BWR4 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
Usp40Q8BWR4 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Usp40Q8BWR4 Gm24318-201ENSMUST00000104490 131 ntBASIC5.57□□□□□ -1.52
Usp40Q8BWR4 Gm13170-201ENSMUST00000119716 643 ntBASIC5.57□□□□□ -1.52
Usp40Q8BWR4 Gm13717-201ENSMUST00000119868 365 ntBASIC5.57□□□□□ -1.52
Usp40Q8BWR4 Gm14162-201ENSMUST00000121985 601 ntBASIC5.57□□□□□ -1.52
Usp40Q8BWR4 Gm23332-201ENSMUST00000157424 275 ntBASIC5.57□□□□□ -1.52
Usp40Q8BWR4 Gm25243-201ENSMUST00000174912 207 ntBASIC5.57□□□□□ -1.52
Usp40Q8BWR4 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Usp40Q8BWR4 Mir6541-201ENSMUST00000183649 110 ntBASIC5.57□□□□□ -1.52
Usp40Q8BWR4 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Usp40Q8BWR4 Gm38008-201ENSMUST00000195333 518 ntBASIC5.57□□□□□ -1.52
Usp40Q8BWR4 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms