Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
Smarca1Q6PGB8 Gm22091-201ENSMUST00000116908 127 ntBASIC4.23□□□□□ -1.73
Smarca1Q6PGB8 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC4.23□□□□□ -1.73
Smarca1Q6PGB8 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC4.23□□□□□ -1.73
Smarca1Q6PGB8 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Smarca1Q6PGB8 Gm22059-201ENSMUST00000157544 104 ntBASIC4.23□□□□□ -1.73
Smarca1Q6PGB8 Gm25436-201ENSMUST00000158275 145 ntBASIC4.23□□□□□ -1.73
Smarca1Q6PGB8 Gm26173-201ENSMUST00000158416 136 ntBASIC4.23□□□□□ -1.73
Smarca1Q6PGB8 Gm23702-201ENSMUST00000158840 130 ntBASIC4.23□□□□□ -1.73
Smarca1Q6PGB8 Ear-ps3-201ENSMUST00000168308 445 ntBASIC4.23□□□□□ -1.73
Smarca1Q6PGB8 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC4.23□□□□□ -1.73
Smarca1Q6PGB8 Gm26746-201ENSMUST00000181722 487 ntBASIC4.23□□□□□ -1.73
Smarca1Q6PGB8 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC4.23□□□□□ -1.73
Smarca1Q6PGB8 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC4.23□□□□□ -1.73
Smarca1Q6PGB8 Gm44521-201ENSMUST00000206469 217 ntBASIC4.23□□□□□ -1.73
Smarca1Q6PGB8 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC4.23□□□□□ -1.73
Smarca1Q6PGB8 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC4.23□□□□□ -1.73
Smarca1Q6PGB8 Gm8785-201ENSMUST00000220259 487 ntBASIC4.23□□□□□ -1.73
Smarca1Q6PGB8 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Smarca1Q6PGB8 AC121966.1-201ENSMUST00000221458 282 ntBASIC4.23□□□□□ -1.73
Smarca1Q6PGB8 AC167192.4-201ENSMUST00000224087 993 ntBASIC4.23□□□□□ -1.73
Smarca1Q6PGB8 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Smarca1Q6PGB8 Gm23443-201ENSMUST00000082916 128 ntBASIC4.23□□□□□ -1.73
Smarca1Q6PGB8 Gm24610-201ENSMUST00000083270 109 ntBASIC4.23□□□□□ -1.73
Smarca1Q6PGB8 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Smarca1Q6PGB8 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
Smarca1Q6PGB8 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
Smarca1Q6PGB8 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Smarca1Q6PGB8 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Smarca1Q6PGB8 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Smarca1Q6PGB8 Gm22591-201ENSMUST00000104243 106 ntBASIC4.22□□□□□ -1.73
Smarca1Q6PGB8 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC4.22□□□□□ -1.73
Smarca1Q6PGB8 Gm14469-201ENSMUST00000118363 202 ntBASIC4.22□□□□□ -1.73
Smarca1Q6PGB8 Gm11219-201ENSMUST00000118565 358 ntBASIC4.22□□□□□ -1.73
Smarca1Q6PGB8 Gm12458-201ENSMUST00000119387 495 ntBASIC4.22□□□□□ -1.73
Smarca1Q6PGB8 Gm11982-201ENSMUST00000121480 314 ntBASIC4.22□□□□□ -1.73
Smarca1Q6PGB8 Gm23463-201ENSMUST00000122468 99 ntBASIC4.22□□□□□ -1.73
Smarca1Q6PGB8 Gm24836-201ENSMUST00000122609 108 ntBASIC4.22□□□□□ -1.73
Smarca1Q6PGB8 Gm25666-201ENSMUST00000157702 107 ntBASIC4.22□□□□□ -1.73
Smarca1Q6PGB8 Gm26171-201ENSMUST00000158422 131 ntBASIC4.22□□□□□ -1.73
Smarca1Q6PGB8 Gm26005-201ENSMUST00000158802 134 ntBASIC4.22□□□□□ -1.73
Smarca1Q6PGB8 Gm23473-201ENSMUST00000158883 116 ntBASIC4.22□□□□□ -1.73
Smarca1Q6PGB8 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC4.22□□□□□ -1.73
Smarca1Q6PGB8 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC4.22□□□□□ -1.73
Smarca1Q6PGB8 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC4.22□□□□□ -1.73
Smarca1Q6PGB8 Mir6408-201ENSMUST00000183643 91 ntBASIC4.22□□□□□ -1.73
Smarca1Q6PGB8 Gm28802-201ENSMUST00000188624 944 ntBASIC4.22□□□□□ -1.73
Smarca1Q6PGB8 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC4.22□□□□□ -1.73
Smarca1Q6PGB8 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Smarca1Q6PGB8 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC4.22□□□□□ -1.73
Smarca1Q6PGB8 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Smarca1Q6PGB8 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC4.22□□□□□ -1.73
Smarca1Q6PGB8 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Smarca1Q6PGB8 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Smarca1Q6PGB8 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Smarca1Q6PGB8 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Smarca1Q6PGB8 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Smarca1Q6PGB8 Gm14910-201ENSMUST00000121037 1805 ntBASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Gm25727-201ENSMUST00000104522 131 ntBASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Gm12598-201ENSMUST00000117333 830 ntBASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Gm13650-201ENSMUST00000117729 433 ntBASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Gm6923-201ENSMUST00000118343 406 ntBASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Gm13155-201ENSMUST00000119277 646 ntBASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Gm15113-201ENSMUST00000119280 836 ntBASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Gm14945-201ENSMUST00000119556 1118 ntBASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Gm12137-201ENSMUST00000119565 346 ntBASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Gm8178-201ENSMUST00000121570 646 ntBASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Gm23885-201ENSMUST00000122682 294 ntBASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Gm22219-201ENSMUST00000157562 319 ntBASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Ear-ps12-201ENSMUST00000161720 451 ntBASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Gm38329-201ENSMUST00000193473 427 ntBASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Gm17771-201ENSMUST00000194477 1147 ntBASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Gm31230-201ENSMUST00000199725 785 ntBASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Gm43155-201ENSMUST00000202661 494 ntBASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Gm18488-201ENSMUST00000215082 364 ntBASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 AC183092.2-201ENSMUST00000225542 1153 ntBASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 AC140451.2-202ENSMUST00000226156 574 ntBASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 AC125523.1-201ENSMUST00000228018 934 ntBASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Gm26128-201ENSMUST00000083170 110 ntBASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Gm3616-201ENSMUST00000174430 2514 ntBASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Smarca1Q6PGB8 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Smarca1Q6PGB8 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC4.2□□□□□ -1.74
Smarca1Q6PGB8 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms