Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Mir3964-201ENSMUST00000174898 74 ntBASIC4.64□□□□□ -1.67
Scaf4Q6PFF0 Gm27409-201ENSMUST00000184727 80 ntBASIC4.64□□□□□ -1.67
Scaf4Q6PFF0 Gm29610-201ENSMUST00000187749 453 ntBASIC4.64□□□□□ -1.67
Scaf4Q6PFF0 Gm9775-201ENSMUST00000189402 331 ntBASIC4.64□□□□□ -1.67
Scaf4Q6PFF0 Gm29262-201ENSMUST00000190084 196 ntBASIC4.64□□□□□ -1.67
Scaf4Q6PFF0 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC4.64□□□□□ -1.67
Scaf4Q6PFF0 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.64□□□□□ -1.67
Scaf4Q6PFF0 Gm43554-201ENSMUST00000199987 186 ntBASIC4.64□□□□□ -1.67
Scaf4Q6PFF0 Gm42666-201ENSMUST00000201954 152 ntBASIC4.64□□□□□ -1.67
Scaf4Q6PFF0 Gm29793-201ENSMUST00000202874 460 ntBASIC4.64□□□□□ -1.67
Scaf4Q6PFF0 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC4.64□□□□□ -1.67
Scaf4Q6PFF0 Gm45616-201ENSMUST00000211711 319 ntBASIC4.64□□□□□ -1.67
Scaf4Q6PFF0 Gm45730-201ENSMUST00000212560 395 ntBASIC4.64□□□□□ -1.67
Scaf4Q6PFF0 Gm45710-201ENSMUST00000212847 215 ntBASIC4.64□□□□□ -1.67
Scaf4Q6PFF0 Gm45777-201ENSMUST00000213009 301 ntBASIC4.64□□□□□ -1.67
Scaf4Q6PFF0 AC122332.1-201ENSMUST00000214384 285 ntBASIC4.64□□□□□ -1.67
Scaf4Q6PFF0 AC158803.1-201ENSMUST00000219495 316 ntBASIC4.64□□□□□ -1.67
Scaf4Q6PFF0 AC167229.1-201ENSMUST00000220057 469 ntBASIC4.64□□□□□ -1.67
Scaf4Q6PFF0 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC4.64□□□□□ -1.67
Scaf4Q6PFF0 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.64□□□□□ -1.67
Scaf4Q6PFF0 AC117656.1-201ENSMUST00000225826 339 ntBASIC4.64□□□□□ -1.67
Scaf4Q6PFF0 Gm45066-201ENSMUST00000207528 2551 ntBASIC4.64□□□□□ -1.67
Scaf4Q6PFF0 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Scaf4Q6PFF0 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Scaf4Q6PFF0 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Scaf4Q6PFF0 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Scaf4Q6PFF0 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Scaf4Q6PFF0 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Scaf4Q6PFF0 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Gm23910-201ENSMUST00000104597 132 ntBASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Mir466j-201ENSMUST00000116876 122 ntBASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Gm15073-201ENSMUST00000117432 634 ntBASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Gm13533-201ENSMUST00000121104 177 ntBASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Gm15147-201ENSMUST00000122263 483 ntBASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Gm23167-201ENSMUST00000157155 103 ntBASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Gm16114-201ENSMUST00000161930 300 ntBASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Gm5139-201ENSMUST00000175943 249 ntBASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Gm38098-201ENSMUST00000194115 241 ntBASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Gm43393-201ENSMUST00000200147 194 ntBASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Gm44419-201ENSMUST00000203338 229 ntBASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Gm45395-201ENSMUST00000209891 559 ntBASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Gm18850-201ENSMUST00000211578 388 ntBASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Gm46327-201ENSMUST00000218240 365 ntBASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 CT572985.2-201ENSMUST00000220496 211 ntBASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 AC131178.1-201ENSMUST00000228649 492 ntBASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Gm25140-201ENSMUST00000083254 140 ntBASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Gm21379-201ENSMUST00000179772 1955 ntBASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Gm20345-201ENSMUST00000175839 2414 ntBASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Scaf4Q6PFF0 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Scaf4Q6PFF0 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Scaf4Q6PFF0 Gm45324-201ENSMUST00000211193 5638 ntBASIC4.62□□□□□ -1.67
Scaf4Q6PFF0 Gm7988-201ENSMUST00000196623 2297 ntBASIC4.62□□□□□ -1.67
Scaf4Q6PFF0 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Scaf4Q6PFF0 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Scaf4Q6PFF0 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Scaf4Q6PFF0 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Scaf4Q6PFF0 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Scaf4Q6PFF0 Gm23274-201ENSMUST00000104056 130 ntBASIC4.62□□□□□ -1.67
Scaf4Q6PFF0 Gm14013-201ENSMUST00000119006 270 ntBASIC4.62□□□□□ -1.67
Scaf4Q6PFF0 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC4.62□□□□□ -1.67
Scaf4Q6PFF0 Gm12087-201ENSMUST00000121878 258 ntBASIC4.62□□□□□ -1.67
Scaf4Q6PFF0 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.62□□□□□ -1.67
Scaf4Q6PFF0 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC4.62□□□□□ -1.67
Scaf4Q6PFF0 Gm22843-201ENSMUST00000157710 134 ntBASIC4.62□□□□□ -1.67
Scaf4Q6PFF0 Gm25447-201ENSMUST00000158997 128 ntBASIC4.62□□□□□ -1.67
Scaf4Q6PFF0 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Scaf4Q6PFF0 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.62□□□□□ -1.67
Scaf4Q6PFF0 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Scaf4Q6PFF0 Mir7020-201ENSMUST00000183787 70 ntBASIC4.62□□□□□ -1.67
Scaf4Q6PFF0 Gm27490-201ENSMUST00000184754 128 ntBASIC4.62□□□□□ -1.67
Scaf4Q6PFF0 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC4.62□□□□□ -1.67
Scaf4Q6PFF0 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Scaf4Q6PFF0 Gm37681-201ENSMUST00000193880 727 ntBASIC4.62□□□□□ -1.67
Scaf4Q6PFF0 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC4.62□□□□□ -1.67
Scaf4Q6PFF0 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms