Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Herc4Q6PAV2 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.64□□□□□ -1.83
Herc4Q6PAV2 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Herc4Q6PAV2 Gm14622-201ENSMUST00000117117 468 ntBASIC3.64□□□□□ -1.83
Herc4Q6PAV2 Gm13511-201ENSMUST00000121167 363 ntBASIC3.64□□□□□ -1.83
Herc4Q6PAV2 Gm23391-201ENSMUST00000157579 104 ntBASIC3.64□□□□□ -1.83
Herc4Q6PAV2 Gm23312-201ENSMUST00000158774 102 ntBASIC3.64□□□□□ -1.83
Herc4Q6PAV2 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.64□□□□□ -1.83
Herc4Q6PAV2 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Herc4Q6PAV2 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
Herc4Q6PAV2 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC3.64□□□□□ -1.83
Herc4Q6PAV2 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Herc4Q6PAV2 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Herc4Q6PAV2 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.64□□□□□ -1.83
Herc4Q6PAV2 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Herc4Q6PAV2 Gm20811-201ENSMUST00000190500 553 ntBASIC3.64□□□□□ -1.83
Herc4Q6PAV2 Gm37578-201ENSMUST00000192256 1177 ntBASIC3.64□□□□□ -1.83
Herc4Q6PAV2 Gm37828-201ENSMUST00000192496 432 ntBASIC3.64□□□□□ -1.83
Herc4Q6PAV2 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC3.64□□□□□ -1.83
Herc4Q6PAV2 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC3.64□□□□□ -1.83
Herc4Q6PAV2 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Herc4Q6PAV2 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.64□□□□□ -1.83
Herc4Q6PAV2 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.64□□□□□ -1.83
Herc4Q6PAV2 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.64□□□□□ -1.83
Herc4Q6PAV2 AC126275.2-201ENSMUST00000225224 253 ntBASIC3.64□□□□□ -1.83
Herc4Q6PAV2 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Herc4Q6PAV2 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Herc4Q6PAV2 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.64□□□□□ -1.83
Herc4Q6PAV2 Gm10237-201ENSMUST00000078393 273 ntBASIC3.64□□□□□ -1.83
Herc4Q6PAV2 Gm22293-201ENSMUST00000083314 109 ntBASIC3.64□□□□□ -1.83
Herc4Q6PAV2 Gm44708-201ENSMUST00000205580 2237 ntBASIC3.64□□□□□ -1.83
Herc4Q6PAV2 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Herc4Q6PAV2 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Herc4Q6PAV2 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
Herc4Q6PAV2 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
Herc4Q6PAV2 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm24376-201ENSMUST00000104399 127 ntBASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm12276-201ENSMUST00000121709 301 ntBASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm23326-201ENSMUST00000157419 105 ntBASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm22380-201ENSMUST00000157479 95 ntBASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm22532-201ENSMUST00000158822 140 ntBASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm7346-201ENSMUST00000169661 476 ntBASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm8403-201ENSMUST00000189712 1298 ntBASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm28314-201ENSMUST00000191276 345 ntBASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm37104-201ENSMUST00000193278 196 ntBASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC3.63□□□□□ -1.83
Herc4Q6PAV2 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 AL929285.1-201ENSMUST00000215522 229 ntBASIC3.63□□□□□ -1.83
Herc4Q6PAV2 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.63□□□□□ -1.83
Herc4Q6PAV2 CT009510.2-203ENSMUST00000226704 2136 ntBASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Herc4Q6PAV2 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Herc4Q6PAV2 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.62□□□□□ -1.83
Herc4Q6PAV2 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Herc4Q6PAV2 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.62□□□□□ -1.83
Herc4Q6PAV2 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.62□□□□□ -1.83
Herc4Q6PAV2 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Herc4Q6PAV2 Gm22497-201ENSMUST00000104499 131 ntBASIC3.62□□□□□ -1.83
Herc4Q6PAV2 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms