Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm29573-201ENSMUST00000190291 919 ntBASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm43513-201ENSMUST00000199779 1076 ntBASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm43155-201ENSMUST00000202661 494 ntBASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm43884-201ENSMUST00000204251 559 ntBASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm6112-201ENSMUST00000208037 629 ntBASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm45366-201ENSMUST00000209828 384 ntBASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm18194-201ENSMUST00000210455 481 ntBASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm17989-201ENSMUST00000211543 412 ntBASIC4.26□□□□□ -1.73
Usp49Q6P9L4 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm46994-201ENSMUST00000221523 219 ntBASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Gm44625-201ENSMUST00000207838 1561 ntBASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Usp49Q6P9L4 AC147615.2-201ENSMUST00000219876 2154 ntBASIC4.26□□□□□ -1.73
Usp49Q6P9L4 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Gm14751-201ENSMUST00000117693 222 ntBASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Gm12370-201ENSMUST00000117809 604 ntBASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Gm14411-201ENSMUST00000121798 914 ntBASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Gm22199-201ENSMUST00000122660 126 ntBASIC4.25□□□□□ -1.73
Usp49Q6P9L4 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Gm2020-201ENSMUST00000145242 579 ntBASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Gm25553-201ENSMUST00000158076 79 ntBASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Gm16490-201ENSMUST00000165299 351 ntBASIC4.25□□□□□ -1.73
Usp49Q6P9L4 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Gm24315-201ENSMUST00000177835 127 ntBASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Gm23619-201ENSMUST00000178411 94 ntBASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Gm25474-201ENSMUST00000179052 94 ntBASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Gm22047-201ENSMUST00000179176 94 ntBASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Gm27317-201ENSMUST00000183533 95 ntBASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Gm27539-201ENSMUST00000184971 224 ntBASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Gm43651-201ENSMUST00000199796 439 ntBASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Gm43975-201ENSMUST00000203023 481 ntBASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Gm45162-201ENSMUST00000209013 618 ntBASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Gm45735-201ENSMUST00000212779 319 ntBASIC4.25□□□□□ -1.73
Usp49Q6P9L4 AC116589.1-201ENSMUST00000220634 327 ntBASIC4.25□□□□□ -1.73
Usp49Q6P9L4 AC187103.4-202ENSMUST00000225091 230 ntBASIC4.25□□□□□ -1.73
Usp49Q6P9L4 AC138718.1-201ENSMUST00000225947 1009 ntBASIC4.25□□□□□ -1.73
Usp49Q6P9L4 AC160930.1-201ENSMUST00000227194 337 ntBASIC4.25□□□□□ -1.73
Usp49Q6P9L4 AC155167.1-201ENSMUST00000228931 614 ntBASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Olfr1193-201ENSMUST00000081697 957 ntBASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Gm16261-201ENSMUST00000096813 205 ntBASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Gm44525-201ENSMUST00000183129 2634 ntBASIC4.25□□□□□ -1.73
Usp49Q6P9L4 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC4.24□□□□□ -1.73
Usp49Q6P9L4 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms