Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm15421-202ENSMUST00000118224 399 ntBASIC2.03□□□□□ -2.08
Col7a1Q63870 Gm12495-201ENSMUST00000119750 447 ntBASIC2.03□□□□□ -2.08
Col7a1Q63870 Gm13862-201ENSMUST00000121220 197 ntBASIC2.03□□□□□ -2.08
Col7a1Q63870 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC2.03□□□□□ -2.08
Col7a1Q63870 Gm24010-201ENSMUST00000157731 282 ntBASIC2.03□□□□□ -2.08
Col7a1Q63870 Gm23043-201ENSMUST00000157890 109 ntBASIC2.03□□□□□ -2.08
Col7a1Q63870 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Col7a1Q63870 Gm42666-201ENSMUST00000201954 152 ntBASIC2.03□□□□□ -2.08
Col7a1Q63870 AC159819.1-201ENSMUST00000213911 328 ntBASIC2.03□□□□□ -2.08
Col7a1Q63870 AC122924.2-201ENSMUST00000220799 298 ntBASIC2.03□□□□□ -2.08
Col7a1Q63870 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC2.03□□□□□ -2.08
Col7a1Q63870 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Col7a1Q63870 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
Col7a1Q63870 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC2.03□□□□□ -2.08
Col7a1Q63870 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Col7a1Q63870 Gm43648-201ENSMUST00000197775 2485 ntBASIC2.03□□□□□ -2.08
Col7a1Q63870 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC2.03□□□□□ -2.08
Col7a1Q63870 Gm43526-201ENSMUST00000196666 1565 ntBASIC2.03□□□□□ -2.08
Col7a1Q63870 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
Col7a1Q63870 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
Col7a1Q63870 Gm25170-201ENSMUST00000104191 129 ntBASIC2.03□□□□□ -2.08
Col7a1Q63870 Gm23967-201ENSMUST00000175062 78 ntBASIC2.03□□□□□ -2.08
Col7a1Q63870 Gm3852-201ENSMUST00000182781 264 ntBASIC2.03□□□□□ -2.08
Col7a1Q63870 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC2.03□□□□□ -2.08
Col7a1Q63870 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Col7a1Q63870 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC2.03□□□□□ -2.08
Col7a1Q63870 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Col7a1Q63870 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Col7a1Q63870 Gm24048-201ENSMUST00000102411 106 ntBASIC2.02□□□□□ -2.09
Col7a1Q63870 Gm14159-201ENSMUST00000119832 451 ntBASIC2.02□□□□□ -2.09
Col7a1Q63870 Gm23179-201ENSMUST00000158693 304 ntBASIC2.02□□□□□ -2.09
Col7a1Q63870 Gm4052-201ENSMUST00000220890 451 ntBASIC2.02□□□□□ -2.09
Col7a1Q63870 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.02□□□□□ -2.09
Col7a1Q63870 AC159242.1-201ENSMUST00000225832 194 ntBASIC2.02□□□□□ -2.09
Col7a1Q63870 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Col7a1Q63870 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Col7a1Q63870 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
Col7a1Q63870 Gm37900-201ENSMUST00000195510 3805 ntBASIC2.02□□□□□ -2.09
Col7a1Q63870 Gm7485-201ENSMUST00000119502 1109 ntBASIC2.02□□□□□ -2.09
Col7a1Q63870 Gm27786-201ENSMUST00000184337 70 ntBASIC2.02□□□□□ -2.09
Col7a1Q63870 Gm18727-201ENSMUST00000185981 553 ntBASIC2.02□□□□□ -2.09
Col7a1Q63870 Gm28534-201ENSMUST00000187744 676 ntBASIC2.02□□□□□ -2.09
Col7a1Q63870 Gm44938-201ENSMUST00000208614 427 ntBASIC2.02□□□□□ -2.09
Col7a1Q63870 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Col7a1Q63870 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC2.02□□□□□ -2.09
Col7a1Q63870 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Col7a1Q63870 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Col7a1Q63870 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
Col7a1Q63870 Gm37652-201ENSMUST00000195290 2095 ntBASIC2.02□□□□□ -2.09
Col7a1Q63870 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
Col7a1Q63870 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Col7a1Q63870 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Col7a1Q63870 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Col7a1Q63870 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
Col7a1Q63870 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.01□□□□□ -2.09
Col7a1Q63870 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Col7a1Q63870 Gm24876-201ENSMUST00000158780 92 ntBASIC2.01□□□□□ -2.09
Col7a1Q63870 Gm23267-201ENSMUST00000178490 132 ntBASIC2.01□□□□□ -2.09
Col7a1Q63870 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC2.01□□□□□ -2.09
Col7a1Q63870 AC118230.1-201ENSMUST00000220196 656 ntBASIC2.01□□□□□ -2.09
Col7a1Q63870 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC2.01□□□□□ -2.09
Col7a1Q63870 Gm21033-201ENSMUST00000208590 2608 ntBASIC2.01□□□□□ -2.09
Col7a1Q63870 Gm38269-201ENSMUST00000194549 3298 ntBASIC2.01□□□□□ -2.09
Col7a1Q63870 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Col7a1Q63870 Gm37402-201ENSMUST00000194525 5000 ntBASIC2.01□□□□□ -2.09
Col7a1Q63870 Gm14957-201ENSMUST00000121069 817 ntBASIC2.01□□□□□ -2.09
Col7a1Q63870 Gm26864-201ENSMUST00000181346 156 ntBASIC2.01□□□□□ -2.09
Col7a1Q63870 Gm28404-201ENSMUST00000190242 453 ntBASIC2.01□□□□□ -2.09
Col7a1Q63870 Gm38334-201ENSMUST00000195060 313 ntBASIC2.01□□□□□ -2.09
Col7a1Q63870 Gm43276-201ENSMUST00000199712 364 ntBASIC2.01□□□□□ -2.09
Col7a1Q63870 Gm5655-201ENSMUST00000221078 901 ntBASIC2.01□□□□□ -2.09
Col7a1Q63870 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Col7a1Q63870 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
Col7a1Q63870 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Col7a1Q63870 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.01□□□□□ -2.09
Col7a1Q63870 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Col7a1Q63870 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC2.01□□□□□ -2.09
Col7a1Q63870 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.01□□□□□ -2.09
Col7a1Q63870 Mir6985-201ENSMUST00000184641 61 ntBASIC2.01□□□□□ -2.09
Col7a1Q63870 Gm37162-201ENSMUST00000191708 551 ntBASIC2.01□□□□□ -2.09
Col7a1Q63870 Gm43655-201ENSMUST00000197367 222 ntBASIC2.01□□□□□ -2.09
Col7a1Q63870 Gm4057-201ENSMUST00000221407 368 ntBASIC2.01□□□□□ -2.09
Col7a1Q63870 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Col7a1Q63870 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Col7a1Q63870 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC2□□□□□ -2.09
Col7a1Q63870 Gm44789-201ENSMUST00000207195 3101 ntBASIC2□□□□□ -2.09
Col7a1Q63870 Gm37393-201ENSMUST00000195118 3870 ntBASIC2□□□□□ -2.09
Col7a1Q63870 Gm25496-201ENSMUST00000104430 120 ntBASIC2□□□□□ -2.09
Col7a1Q63870 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Col7a1Q63870 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Col7a1Q63870 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC2□□□□□ -2.09
Col7a1Q63870 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC2□□□□□ -2.09
Col7a1Q63870 Ear-ps7-201ENSMUST00000161287 442 ntBASIC2□□□□□ -2.09
Col7a1Q63870 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Col7a1Q63870 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC2□□□□□ -2.09
Col7a1Q63870 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC2□□□□□ -2.09
Col7a1Q63870 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC2□□□□□ -2.09
Col7a1Q63870 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Col7a1Q63870 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC2□□□□□ -2.09
Col7a1Q63870 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms