Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC4.31□□□□□ -1.72
Ift88Q61371 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
Ift88Q61371 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Ift88Q61371 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Ift88Q61371 Gm28634-201ENSMUST00000191087 2613 ntBASIC4.31□□□□□ -1.72
Ift88Q61371 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Ift88Q61371 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ift88Q61371 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.3□□□□□ -1.72
Ift88Q61371 Gm7905-201ENSMUST00000119933 1386 ntBASIC4.3□□□□□ -1.72
Ift88Q61371 Gm6207-201ENSMUST00000120075 1386 ntBASIC4.3□□□□□ -1.72
Ift88Q61371 Gm6228-201ENSMUST00000178856 1386 ntBASIC4.3□□□□□ -1.72
Ift88Q61371 Gm6221-201ENSMUST00000180064 1386 ntBASIC4.3□□□□□ -1.72
Ift88Q61371 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC4.3□□□□□ -1.72
Ift88Q61371 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ift88Q61371 Gm14880-201ENSMUST00000117581 292 ntBASIC4.3□□□□□ -1.72
Ift88Q61371 Gm11566-201ENSMUST00000118550 203 ntBASIC4.3□□□□□ -1.72
Ift88Q61371 Gm12190-201ENSMUST00000120001 187 ntBASIC4.3□□□□□ -1.72
Ift88Q61371 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC4.3□□□□□ -1.72
Ift88Q61371 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC4.3□□□□□ -1.72
Ift88Q61371 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC4.3□□□□□ -1.72
Ift88Q61371 Gm22755-201ENSMUST00000157143 100 ntBASIC4.3□□□□□ -1.72
Ift88Q61371 Gm2862-201ENSMUST00000161524 328 ntBASIC4.3□□□□□ -1.72
Ift88Q61371 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC4.3□□□□□ -1.72
Ift88Q61371 Gm21729-201ENSMUST00000180058 664 ntBASIC4.3□□□□□ -1.72
Ift88Q61371 Gm21853-201ENSMUST00000180071 664 ntBASIC4.3□□□□□ -1.72
Ift88Q61371 Gm26914-201ENSMUST00000182262 223 ntBASIC4.3□□□□□ -1.72
Ift88Q61371 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC4.3□□□□□ -1.72
Ift88Q61371 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Ift88Q61371 Mir6341-201ENSMUST00000183490 121 ntBASIC4.3□□□□□ -1.72
Ift88Q61371 Gm27286-201ENSMUST00000184934 179 ntBASIC4.3□□□□□ -1.72
Ift88Q61371 Gm29610-201ENSMUST00000187749 453 ntBASIC4.3□□□□□ -1.72
Ift88Q61371 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC4.3□□□□□ -1.72
Ift88Q61371 Gm29495-201ENSMUST00000189319 664 ntBASIC4.3□□□□□ -1.72
Ift88Q61371 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC4.3□□□□□ -1.72
Ift88Q61371 Gm43541-201ENSMUST00000197208 581 ntBASIC4.3□□□□□ -1.72
Ift88Q61371 Gm45173-201ENSMUST00000206819 305 ntBASIC4.3□□□□□ -1.72
Ift88Q61371 Gm8745-201ENSMUST00000207846 782 ntBASIC4.3□□□□□ -1.72
Ift88Q61371 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.3□□□□□ -1.72
Ift88Q61371 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Ift88Q61371 Gm9068-201ENSMUST00000217393 455 ntBASIC4.3□□□□□ -1.72
Ift88Q61371 Gm5374-201ENSMUST00000222868 657 ntBASIC4.3□□□□□ -1.72
Ift88Q61371 AC147633.1-201ENSMUST00000225134 259 ntBASIC4.3□□□□□ -1.72
Ift88Q61371 AC132112.1-201ENSMUST00000226354 505 ntBASIC4.3□□□□□ -1.72
Ift88Q61371 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Ift88Q61371 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ift88Q61371 Mir30e-201ENSMUST00000083475 92 ntBASIC4.3□□□□□ -1.72
Ift88Q61371 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Ift88Q61371 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Ift88Q61371 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Ift88Q61371 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Ift88Q61371 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ift88Q61371 AC153948.1-201ENSMUST00000219080 3838 ntBASIC4.3□□□□□ -1.72
Ift88Q61371 Gm43751-201ENSMUST00000200275 3071 ntBASIC4.3□□□□□ -1.72
Ift88Q61371 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ift88Q61371 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Ift88Q61371 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Ift88Q61371 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Ift88Q61371 AC125532.1-201ENSMUST00000216210 2334 ntBASIC4.29□□□□□ -1.72
Ift88Q61371 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Ift88Q61371 AC126033.1-201ENSMUST00000227628 6773 ntBASIC4.29□□□□□ -1.72
Ift88Q61371 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ift88Q61371 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Ift88Q61371 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC4.29□□□□□ -1.72
Ift88Q61371 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Ift88Q61371 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Ift88Q61371 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Ift88Q61371 Gm15151-201ENSMUST00000117106 177 ntBASIC4.29□□□□□ -1.72
Ift88Q61371 Gm11923-201ENSMUST00000118135 508 ntBASIC4.29□□□□□ -1.72
Ift88Q61371 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC4.29□□□□□ -1.72
Ift88Q61371 Gm7916-201ENSMUST00000120325 456 ntBASIC4.29□□□□□ -1.72
Ift88Q61371 Gm14240-201ENSMUST00000120353 546 ntBASIC4.29□□□□□ -1.72
Ift88Q61371 Gm11522-201ENSMUST00000120533 176 ntBASIC4.29□□□□□ -1.72
Ift88Q61371 Gm25784-201ENSMUST00000122524 81 ntBASIC4.29□□□□□ -1.72
Ift88Q61371 Gm25806-201ENSMUST00000122782 122 ntBASIC4.29□□□□□ -1.72
Ift88Q61371 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4.29□□□□□ -1.72
Ift88Q61371 Gm25163-201ENSMUST00000158905 104 ntBASIC4.29□□□□□ -1.72
Ift88Q61371 Ear-ps3-201ENSMUST00000168308 445 ntBASIC4.29□□□□□ -1.72
Ift88Q61371 Gm24306-201ENSMUST00000180229 79 ntBASIC4.29□□□□□ -1.72
Ift88Q61371 Mir6382-201ENSMUST00000184055 110 ntBASIC4.29□□□□□ -1.72
Ift88Q61371 Gm28283-201ENSMUST00000185509 178 ntBASIC4.29□□□□□ -1.72
Ift88Q61371 Gm28385-201ENSMUST00000185671 292 ntBASIC4.29□□□□□ -1.72
Ift88Q61371 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.29□□□□□ -1.72
Ift88Q61371 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC4.29□□□□□ -1.72
Ift88Q61371 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC4.29□□□□□ -1.72
Ift88Q61371 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC4.29□□□□□ -1.72
Ift88Q61371 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC4.29□□□□□ -1.72
Ift88Q61371 Gm43651-201ENSMUST00000199796 439 ntBASIC4.29□□□□□ -1.72
Ift88Q61371 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC4.29□□□□□ -1.72
Ift88Q61371 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Ift88Q61371 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC4.29□□□□□ -1.72
Ift88Q61371 AC159621.1-201ENSMUST00000223249 163 ntBASIC4.29□□□□□ -1.72
Ift88Q61371 AL645546.1-201ENSMUST00000225001 189 ntBASIC4.29□□□□□ -1.72
Ift88Q61371 AC117656.3-202ENSMUST00000225842 1055 ntBASIC4.29□□□□□ -1.72
Ift88Q61371 AC140451.2-202ENSMUST00000226156 574 ntBASIC4.29□□□□□ -1.72
Ift88Q61371 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ift88Q61371 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
Ift88Q61371 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Ift88Q61371 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Ift88Q61371 Mir370-201ENSMUST00000083499 79 ntBASIC4.29□□□□□ -1.72
Ift88Q61371 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms