Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm7485-201ENSMUST00000119502 1109 ntBASIC4.17□□□□□ -1.74
CtcfQ61164 Gm14238-201ENSMUST00000120227 323 ntBASIC4.17□□□□□ -1.74
CtcfQ61164 Gm13419-201ENSMUST00000121711 271 ntBASIC4.17□□□□□ -1.74
CtcfQ61164 Gm5963-201ENSMUST00000143451 236 ntBASIC4.17□□□□□ -1.74
CtcfQ61164 Gm23231-201ENSMUST00000157299 104 ntBASIC4.17□□□□□ -1.74
CtcfQ61164 Gm24745-201ENSMUST00000157840 85 ntBASIC4.17□□□□□ -1.74
CtcfQ61164 Gm24724-201ENSMUST00000158230 107 ntBASIC4.17□□□□□ -1.74
CtcfQ61164 Gm23312-201ENSMUST00000158774 102 ntBASIC4.17□□□□□ -1.74
CtcfQ61164 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CtcfQ61164 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC4.17□□□□□ -1.74
CtcfQ61164 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC4.17□□□□□ -1.74
CtcfQ61164 Gm24520-201ENSMUST00000179510 110 ntBASIC4.17□□□□□ -1.74
CtcfQ61164 Mir6414-201ENSMUST00000183685 82 ntBASIC4.17□□□□□ -1.74
CtcfQ61164 Gm28304-201ENSMUST00000185977 312 ntBASIC4.17□□□□□ -1.74
CtcfQ61164 Gm29256-201ENSMUST00000189094 312 ntBASIC4.17□□□□□ -1.74
CtcfQ61164 Gm28484-201ENSMUST00000190606 312 ntBASIC4.17□□□□□ -1.74
CtcfQ61164 Gm43853-201ENSMUST00000197162 301 ntBASIC4.17□□□□□ -1.74
CtcfQ61164 Gm34091-201ENSMUST00000200875 604 ntBASIC4.17□□□□□ -1.74
CtcfQ61164 Gm43227-201ENSMUST00000202239 677 ntBASIC4.17□□□□□ -1.74
CtcfQ61164 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC4.17□□□□□ -1.74
CtcfQ61164 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC4.17□□□□□ -1.74
CtcfQ61164 AC153852.1-201ENSMUST00000217881 567 ntBASIC4.17□□□□□ -1.74
CtcfQ61164 AC124399.1-201ENSMUST00000218334 590 ntBASIC4.17□□□□□ -1.74
CtcfQ61164 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CtcfQ61164 AL590614.1-201ENSMUST00000226037 268 ntBASIC4.17□□□□□ -1.74
CtcfQ61164 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CtcfQ61164 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CtcfQ61164 Gm22293-201ENSMUST00000083314 109 ntBASIC4.17□□□□□ -1.74
CtcfQ61164 Olfr203-201ENSMUST00000089305 924 ntBASIC4.17□□□□□ -1.74
CtcfQ61164 Gm15773-201ENSMUST00000118665 1448 ntBASIC4.17□□□□□ -1.74
CtcfQ61164 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CtcfQ61164 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CtcfQ61164 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CtcfQ61164 Gm37176-201ENSMUST00000193300 4051 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CtcfQ61164 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CtcfQ61164 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CtcfQ61164 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CtcfQ61164 Gm13728-201ENSMUST00000117471 400 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 Gm13087-201ENSMUST00000118298 256 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 Gm13831-201ENSMUST00000118764 302 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 Gm11943-201ENSMUST00000119473 327 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 Gm6584-201ENSMUST00000119671 447 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 Gm14656-201ENSMUST00000120342 502 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 Gm12358-201ENSMUST00000121842 520 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 Gm11506-201ENSMUST00000122414 470 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 Gm22501-201ENSMUST00000158981 127 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 Gm20693-201ENSMUST00000177431 211 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 Mir6938-201ENSMUST00000184173 63 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC4.16□□□□□ -1.74
CtcfQ61164 Gm29550-201ENSMUST00000185543 285 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 Gm3454-201ENSMUST00000185571 412 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 Gm28615-201ENSMUST00000187527 482 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC4.16□□□□□ -1.74
CtcfQ61164 Gm28920-201ENSMUST00000189957 699 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 Ighv1-6-201ENSMUST00000193849 293 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 Gm9722-201ENSMUST00000194568 802 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 Gm44354-201ENSMUST00000196017 143 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 Igkv12-49-201ENSMUST00000197714 278 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC4.16□□□□□ -1.74
CtcfQ61164 Gm43651-201ENSMUST00000199796 439 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 Gm43171-201ENSMUST00000199882 291 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC4.16□□□□□ -1.74
CtcfQ61164 Gm44650-201ENSMUST00000206929 194 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 AC135019.1-201ENSMUST00000219949 307 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC4.16□□□□□ -1.74
CtcfQ61164 AC154426.1-201ENSMUST00000225614 1132 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 AC115878.1-201ENSMUST00000227247 334 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 AC102603.1-201ENSMUST00000227481 584 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CtcfQ61164 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CtcfQ61164 Gm25800-201ENSMUST00000082636 134 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CtcfQ61164 Gm43871-201ENSMUST00000204931 1955 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CtcfQ61164 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.16□□□□□ -1.74
CtcfQ61164 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
CtcfQ61164 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
CtcfQ61164 Gm44078-201ENSMUST00000204652 2646 ntBASIC4.15□□□□□ -1.74
CtcfQ61164 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
CtcfQ61164 Gm37143-201ENSMUST00000195180 3259 ntBASIC4.15□□□□□ -1.75
CtcfQ61164 Gm26387-201ENSMUST00000104238 132 ntBASIC4.15□□□□□ -1.75
CtcfQ61164 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CtcfQ61164 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CtcfQ61164 Gm14887-201ENSMUST00000119522 663 ntBASIC4.15□□□□□ -1.75
CtcfQ61164 Gm16017-201ENSMUST00000119834 208 ntBASIC4.15□□□□□ -1.75
CtcfQ61164 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CtcfQ61164 Gm22960-201ENSMUST00000122517 104 ntBASIC4.15□□□□□ -1.75
CtcfQ61164 Gm25177-201ENSMUST00000122634 117 ntBASIC4.15□□□□□ -1.75
CtcfQ61164 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CtcfQ61164 Gm16250-201ENSMUST00000148974 256 ntBASIC4.15□□□□□ -1.75
CtcfQ61164 Gm16290-201ENSMUST00000161175 474 ntBASIC4.15□□□□□ -1.75
CtcfQ61164 Ear-ps12-201ENSMUST00000161720 451 ntBASIC4.15□□□□□ -1.75
CtcfQ61164 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC4.15□□□□□ -1.75
CtcfQ61164 Gm22395-201ENSMUST00000177427 96 ntBASIC4.15□□□□□ -1.75
CtcfQ61164 Gm27828-201ENSMUST00000184108 119 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms