Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Gm36944-201ENSMUST00000192257 2759 ntBASIC3.09□□□□□ -1.92
Usf1Q61069 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Usf1Q61069 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
Usf1Q61069 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Usf1Q61069 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Usf1Q61069 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Usf1Q61069 Gm15195-201ENSMUST00000118775 263 ntBASIC3.08□□□□□ -1.92
Usf1Q61069 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Usf1Q61069 Gm13155-201ENSMUST00000119277 646 ntBASIC3.08□□□□□ -1.92
Usf1Q61069 Gm8178-201ENSMUST00000121570 646 ntBASIC3.08□□□□□ -1.92
Usf1Q61069 Gm14389-201ENSMUST00000140453 241 ntBASIC3.08□□□□□ -1.92
Usf1Q61069 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Usf1Q61069 Gm22538-201ENSMUST00000158169 299 ntBASIC3.08□□□□□ -1.92
Usf1Q61069 Gm24930-201ENSMUST00000158315 83 ntBASIC3.08□□□□□ -1.92
Usf1Q61069 Gm26214-201ENSMUST00000158581 107 ntBASIC3.08□□□□□ -1.92
Usf1Q61069 Gm26215-201ENSMUST00000158584 139 ntBASIC3.08□□□□□ -1.92
Usf1Q61069 Gm23387-201ENSMUST00000158586 107 ntBASIC3.08□□□□□ -1.92
Usf1Q61069 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Usf1Q61069 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC3.08□□□□□ -1.92
Usf1Q61069 Gm24080-201ENSMUST00000175178 232 ntBASIC3.08□□□□□ -1.92
Usf1Q61069 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Usf1Q61069 Gm26365-201ENSMUST00000179177 94 ntBASIC3.08□□□□□ -1.92
Usf1Q61069 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Usf1Q61069 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Usf1Q61069 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC3.08□□□□□ -1.92
Usf1Q61069 Gm27477-201ENSMUST00000184649 143 ntBASIC3.08□□□□□ -1.92
Usf1Q61069 Mir6715-201ENSMUST00000184990 57 ntBASIC3.08□□□□□ -1.92
Usf1Q61069 Gm43228-201ENSMUST00000200735 264 ntBASIC3.08□□□□□ -1.92
Usf1Q61069 Gm44964-201ENSMUST00000207011 273 ntBASIC3.08□□□□□ -1.92
Usf1Q61069 Gm18645-201ENSMUST00000209593 651 ntBASIC3.08□□□□□ -1.92
Usf1Q61069 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.08□□□□□ -1.92
Usf1Q61069 Gm18585-201ENSMUST00000215197 556 ntBASIC3.08□□□□□ -1.92
Usf1Q61069 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.08□□□□□ -1.92
Usf1Q61069 Gm19987-201ENSMUST00000216339 499 ntBASIC3.08□□□□□ -1.92
Usf1Q61069 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.08□□□□□ -1.92
Usf1Q61069 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Usf1Q61069 Gm26439-201ENSMUST00000082592 106 ntBASIC3.08□□□□□ -1.92
Usf1Q61069 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Usf1Q61069 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Usf1Q61069 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Usf1Q61069 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Usf1Q61069 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.07□□□□□ -1.92
Usf1Q61069 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
Usf1Q61069 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Usf1Q61069 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Usf1Q61069 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Usf1Q61069 Gm24951-201ENSMUST00000102182 109 ntBASIC3.07□□□□□ -1.92
Usf1Q61069 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Usf1Q61069 Gm15087-201ENSMUST00000117465 1172 ntBASIC3.07□□□□□ -1.92
Usf1Q61069 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Usf1Q61069 Gm6797-201ENSMUST00000119440 512 ntBASIC3.07□□□□□ -1.92
Usf1Q61069 Gm7485-201ENSMUST00000119502 1109 ntBASIC3.07□□□□□ -1.92
Usf1Q61069 Gm15190-201ENSMUST00000120855 276 ntBASIC3.07□□□□□ -1.92
Usf1Q61069 Gm6591-201ENSMUST00000121063 434 ntBASIC3.07□□□□□ -1.92
Usf1Q61069 Gm14463-201ENSMUST00000121117 498 ntBASIC3.07□□□□□ -1.92
Usf1Q61069 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC3.07□□□□□ -1.92
Usf1Q61069 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC3.07□□□□□ -1.92
Usf1Q61069 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC3.07□□□□□ -1.92
Usf1Q61069 Gm20672-201ENSMUST00000176605 261 ntBASIC3.07□□□□□ -1.92
Usf1Q61069 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC3.07□□□□□ -1.92
Usf1Q61069 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC3.07□□□□□ -1.92
Usf1Q61069 Gm38268-201ENSMUST00000195813 193 ntBASIC3.07□□□□□ -1.92
Usf1Q61069 Gm43659-201ENSMUST00000200894 628 ntBASIC3.07□□□□□ -1.92
Usf1Q61069 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.07□□□□□ -1.92
Usf1Q61069 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.07□□□□□ -1.92
Usf1Q61069 Gm45513-201ENSMUST00000210228 376 ntBASIC3.07□□□□□ -1.92
Usf1Q61069 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.07□□□□□ -1.92
Usf1Q61069 AC153924.1-201ENSMUST00000220117 312 ntBASIC3.07□□□□□ -1.92
Usf1Q61069 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.07□□□□□ -1.92
Usf1Q61069 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Usf1Q61069 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Usf1Q61069 Gm25403-201ENSMUST00000082971 143 ntBASIC3.07□□□□□ -1.92
Usf1Q61069 Gm23452-201ENSMUST00000083327 107 ntBASIC3.07□□□□□ -1.92
Usf1Q61069 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Usf1Q61069 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Usf1Q61069 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.07□□□□□ -1.92
Usf1Q61069 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Usf1Q61069 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
Usf1Q61069 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.07□□□□□ -1.92
Usf1Q61069 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Usf1Q61069 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Usf1Q61069 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.07□□□□□ -1.92
Usf1Q61069 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.06□□□□□ -1.92
Usf1Q61069 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Usf1Q61069 Gm14600-201ENSMUST00000121032 630 ntBASIC3.06□□□□□ -1.92
Usf1Q61069 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC3.06□□□□□ -1.92
Usf1Q61069 Gm26349-201ENSMUST00000157530 130 ntBASIC3.06□□□□□ -1.92
Usf1Q61069 Gm25981-201ENSMUST00000157921 295 ntBASIC3.06□□□□□ -1.92
Usf1Q61069 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Usf1Q61069 Gm3123-201ENSMUST00000163480 480 ntBASIC3.06□□□□□ -1.92
Usf1Q61069 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
Usf1Q61069 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Usf1Q61069 Gm27783-201ENSMUST00000183534 105 ntBASIC3.06□□□□□ -1.92
Usf1Q61069 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Usf1Q61069 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.06□□□□□ -1.92
Usf1Q61069 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Usf1Q61069 Gm28358-202ENSMUST00000189292 223 ntBASIC3.06□□□□□ -1.92
Usf1Q61069 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Usf1Q61069 Gm20811-201ENSMUST00000190500 553 ntBASIC3.06□□□□□ -1.92
Usf1Q61069 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms