Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 AC132446.1-201ENSMUST00000222655 226 ntBASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 CT025598.1-201ENSMUST00000225140 427 ntBASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 AC154506.1-201ENSMUST00000225178 621 ntBASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Gm22866-201ENSMUST00000083947 177 ntBASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Ube2nl-201ENSMUST00000085228 456 ntBASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC1.76□□□□□ -2.13
Trav3-1Q5R1I8 Gm42967-201ENSMUST00000198647 2312 ntBASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 Gm11284-201ENSMUST00000121910 1887 ntBASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 Gm22231-201ENSMUST00000101027 73 ntBASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 Mir1188-201ENSMUST00000116756 120 ntBASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 Gm12891-201ENSMUST00000119358 240 ntBASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 Gm11797-201ENSMUST00000121336 754 ntBASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 n-R5s68-201ENSMUST00000122639 82 ntBASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 Gm11962-201ENSMUST00000145746 255 ntBASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 Gm24289-201ENSMUST00000157629 135 ntBASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 Gm22910-201ENSMUST00000178568 132 ntBASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 Gm24520-201ENSMUST00000179510 110 ntBASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 Gm33973-201ENSMUST00000195148 534 ntBASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 Gm36776-201ENSMUST00000207006 203 ntBASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 Gm44966-201ENSMUST00000208096 157 ntBASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 Gm9375-201ENSMUST00000208899 903 ntBASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 AC164424.1-201ENSMUST00000221690 170 ntBASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 AC160962.2-201ENSMUST00000224761 632 ntBASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 AC140451.2-202ENSMUST00000226156 574 ntBASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 AC116596.2-203ENSMUST00000227345 731 ntBASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 Mir30b-201ENSMUST00000083542 96 ntBASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 Gm650-201ENSMUST00000144428 1551 ntBASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC1.75□□□□□ -2.13
Trav3-1Q5R1I8 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 AC157570.1-201ENSMUST00000218052 3778 ntBASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 Gm13803-201ENSMUST00000117547 489 ntBASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 Gm7308-201ENSMUST00000121087 447 ntBASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 Gm23540-201ENSMUST00000157543 164 ntBASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 Gm26186-201ENSMUST00000157689 125 ntBASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 Gm16557-201ENSMUST00000159182 191 ntBASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 Gm23633-201ENSMUST00000175293 119 ntBASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 Mir7046-201ENSMUST00000183435 66 ntBASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 Gm27999-201ENSMUST00000183539 193 ntBASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 Gm27189-201ENSMUST00000184119 190 ntBASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 Gm29479-201ENSMUST00000190352 455 ntBASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 Gm7675-201ENSMUST00000208828 686 ntBASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 AC125531.1-201ENSMUST00000219849 221 ntBASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 AC155929.1-201ENSMUST00000220217 1276 ntBASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 AC154594.1-201ENSMUST00000225171 1273 ntBASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 AC124524.1-201ENSMUST00000225833 181 ntBASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 AC158395.1-201ENSMUST00000227206 452 ntBASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 Gm22829-201ENSMUST00000083771 106 ntBASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Trav3-1Q5R1I8 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 Gm22494-201ENSMUST00000104495 128 ntBASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 Gm11367-201ENSMUST00000117802 120 ntBASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 Gm23324-201ENSMUST00000157421 131 ntBASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 Gm22849-201ENSMUST00000157713 307 ntBASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 Gm26085-201ENSMUST00000157900 116 ntBASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 AC154297.1-201ENSMUST00000171334 397 ntBASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 Mir6541-201ENSMUST00000183649 110 ntBASIC1.73□□□□□ -2.13
Trav3-1Q5R1I8 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC1.73□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms