Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm27700-201ENSMUST00000185003 81 ntBASIC3.76□□□□□ -1.81
Trim58Q5NCC9 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Trim58Q5NCC9 Gm29640-201ENSMUST00000187972 278 ntBASIC3.76□□□□□ -1.81
Trim58Q5NCC9 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.76□□□□□ -1.81
Trim58Q5NCC9 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.76□□□□□ -1.81
Trim58Q5NCC9 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
Trim58Q5NCC9 Gm44059-201ENSMUST00000204048 351 ntBASIC3.76□□□□□ -1.81
Trim58Q5NCC9 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Trim58Q5NCC9 Gm7948-201ENSMUST00000212607 844 ntBASIC3.76□□□□□ -1.81
Trim58Q5NCC9 Gm5176-202ENSMUST00000220267 583 ntBASIC3.76□□□□□ -1.81
Trim58Q5NCC9 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC3.76□□□□□ -1.81
Trim58Q5NCC9 Gm23975-201ENSMUST00000082685 106 ntBASIC3.76□□□□□ -1.81
Trim58Q5NCC9 Gm25699-201ENSMUST00000082896 167 ntBASIC3.76□□□□□ -1.81
Trim58Q5NCC9 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
Trim58Q5NCC9 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trim58Q5NCC9 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trim58Q5NCC9 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trim58Q5NCC9 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.75□□□□□ -1.81
Trim58Q5NCC9 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.75□□□□□ -1.81
Trim58Q5NCC9 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Trim58Q5NCC9 Mir499-201ENSMUST00000102357 79 ntBASIC3.75□□□□□ -1.81
Trim58Q5NCC9 Gm12693-201ENSMUST00000121965 483 ntBASIC3.75□□□□□ -1.81
Trim58Q5NCC9 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC3.75□□□□□ -1.81
Trim58Q5NCC9 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.75□□□□□ -1.81
Trim58Q5NCC9 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Trim58Q5NCC9 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC3.75□□□□□ -1.81
Trim58Q5NCC9 Mir6408-201ENSMUST00000183643 91 ntBASIC3.75□□□□□ -1.81
Trim58Q5NCC9 Gm27427-201ENSMUST00000185134 193 ntBASIC3.75□□□□□ -1.81
Trim58Q5NCC9 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.75□□□□□ -1.81
Trim58Q5NCC9 Gm28788-201ENSMUST00000189717 375 ntBASIC3.75□□□□□ -1.81
Trim58Q5NCC9 Gm29558-201ENSMUST00000190134 375 ntBASIC3.75□□□□□ -1.81
Trim58Q5NCC9 Gm18692-201ENSMUST00000193047 511 ntBASIC3.75□□□□□ -1.81
Trim58Q5NCC9 Gm18384-201ENSMUST00000195974 808 ntBASIC3.75□□□□□ -1.81
Trim58Q5NCC9 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC3.75□□□□□ -1.81
Trim58Q5NCC9 Gm43979-201ENSMUST00000203179 475 ntBASIC3.75□□□□□ -1.81
Trim58Q5NCC9 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.75□□□□□ -1.81
Trim58Q5NCC9 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Trim58Q5NCC9 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Trim58Q5NCC9 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC3.75□□□□□ -1.81
Trim58Q5NCC9 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC3.75□□□□□ -1.81
Trim58Q5NCC9 Gm3333-202ENSMUST00000221763 1044 ntBASIC3.75□□□□□ -1.81
Trim58Q5NCC9 AC160114.1-201ENSMUST00000221930 365 ntBASIC3.75□□□□□ -1.81
Trim58Q5NCC9 AC124489.2-201ENSMUST00000223930 589 ntBASIC3.75□□□□□ -1.81
Trim58Q5NCC9 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.75□□□□□ -1.81
Trim58Q5NCC9 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Trim58Q5NCC9 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Trim58Q5NCC9 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC3.75□□□□□ -1.81
Trim58Q5NCC9 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Trim58Q5NCC9 Gm25202-201ENSMUST00000082838 191 ntBASIC3.75□□□□□ -1.81
Trim58Q5NCC9 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Trim58Q5NCC9 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC3.75□□□□□ -1.81
Trim58Q5NCC9 Gm13340-201ENSMUST00000117219 1545 ntBASIC3.75□□□□□ -1.81
Trim58Q5NCC9 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Gm26474-201ENSMUST00000116762 122 ntBASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Gm15193-201ENSMUST00000120224 865 ntBASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Gm13502-201ENSMUST00000121574 684 ntBASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Gm11229-201ENSMUST00000121993 437 ntBASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Gm23183-201ENSMUST00000122595 323 ntBASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Gm17117-201ENSMUST00000163665 299 ntBASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Gm38231-201ENSMUST00000192030 347 ntBASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Gm37438-201ENSMUST00000192813 393 ntBASIC3.74□□□□□ -1.81
Trim58Q5NCC9 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Gm35570-201ENSMUST00000198730 681 ntBASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Gm34091-201ENSMUST00000200875 604 ntBASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Gm42474-201ENSMUST00000201073 505 ntBASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Gm8209-201ENSMUST00000206386 553 ntBASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Gm44830-201ENSMUST00000207667 584 ntBASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Gm45367-201ENSMUST00000210171 347 ntBASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Gm45513-201ENSMUST00000210228 376 ntBASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Gm8681-201ENSMUST00000219115 618 ntBASIC3.74□□□□□ -1.81
Trim58Q5NCC9 AC167669.3-201ENSMUST00000224720 393 ntBASIC3.74□□□□□ -1.81
Trim58Q5NCC9 AC132881.2-201ENSMUST00000225474 709 ntBASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Gm5265-201ENSMUST00000076828 342 ntBASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Trim58Q5NCC9 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Gm26176-201ENSMUST00000083795 105 ntBASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Gm37999-201ENSMUST00000195178 1809 ntBASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Gm38375-201ENSMUST00000194610 2227 ntBASIC3.74□□□□□ -1.81
Trim58Q5NCC9 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms