Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.23□□□□□ -1.89
Clhc1Q5M6W3 Gm19126-201ENSMUST00000207896 509 ntBASIC3.23□□□□□ -1.89
Clhc1Q5M6W3 Gm45327-201ENSMUST00000211612 565 ntBASIC3.23□□□□□ -1.89
Clhc1Q5M6W3 Gm45742-201ENSMUST00000212400 433 ntBASIC3.23□□□□□ -1.89
Clhc1Q5M6W3 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Clhc1Q5M6W3 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC3.23□□□□□ -1.89
Clhc1Q5M6W3 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Clhc1Q5M6W3 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Clhc1Q5M6W3 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Clhc1Q5M6W3 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Clhc1Q5M6W3 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Clhc1Q5M6W3 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Clhc1Q5M6W3 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Clhc1Q5M6W3 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.23□□□□□ -1.89
Clhc1Q5M6W3 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Clhc1Q5M6W3 Gm43216-201ENSMUST00000196295 1333 ntBASIC3.22□□□□□ -1.89
Clhc1Q5M6W3 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Clhc1Q5M6W3 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Clhc1Q5M6W3 Gm24120-201ENSMUST00000103978 129 ntBASIC3.22□□□□□ -1.89
Clhc1Q5M6W3 Gm26145-201ENSMUST00000104476 127 ntBASIC3.22□□□□□ -1.89
Clhc1Q5M6W3 Gm649-201ENSMUST00000117284 1054 ntBASIC3.22□□□□□ -1.89
Clhc1Q5M6W3 Gm13731-201ENSMUST00000117332 196 ntBASIC3.22□□□□□ -1.89
Clhc1Q5M6W3 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Clhc1Q5M6W3 Gm11252-201ENSMUST00000120572 939 ntBASIC3.22□□□□□ -1.89
Clhc1Q5M6W3 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC3.22□□□□□ -1.89
Clhc1Q5M6W3 Gm23671-201ENSMUST00000157472 103 ntBASIC3.22□□□□□ -1.89
Clhc1Q5M6W3 Gm4479-201ENSMUST00000178807 171 ntBASIC3.22□□□□□ -1.89
Clhc1Q5M6W3 Gm29064-201ENSMUST00000187014 813 ntBASIC3.22□□□□□ -1.89
Clhc1Q5M6W3 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC3.22□□□□□ -1.89
Clhc1Q5M6W3 Gm42832-201ENSMUST00000196361 745 ntBASIC3.22□□□□□ -1.89
Clhc1Q5M6W3 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.22□□□□□ -1.89
Clhc1Q5M6W3 Gm44355-201ENSMUST00000200417 104 ntBASIC3.22□□□□□ -1.89
Clhc1Q5M6W3 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.22□□□□□ -1.89
Clhc1Q5M6W3 Gm45146-201ENSMUST00000207108 221 ntBASIC3.22□□□□□ -1.89
Clhc1Q5M6W3 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Clhc1Q5M6W3 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC3.22□□□□□ -1.89
Clhc1Q5M6W3 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC3.22□□□□□ -1.89
Clhc1Q5M6W3 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.22□□□□□ -1.89
Clhc1Q5M6W3 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.22□□□□□ -1.89
Clhc1Q5M6W3 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.22□□□□□ -1.89
Clhc1Q5M6W3 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
Clhc1Q5M6W3 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.22□□□□□ -1.89
Clhc1Q5M6W3 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Clhc1Q5M6W3 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.21□□□□□ -1.89
Clhc1Q5M6W3 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Gm6913-201ENSMUST00000100019 348 ntBASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Gm25313-201ENSMUST00000101817 116 ntBASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Gm12902-201ENSMUST00000118389 322 ntBASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Gm5762-201ENSMUST00000119204 258 ntBASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Gm22339-201ENSMUST00000157718 62 ntBASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Ear-ps3-201ENSMUST00000168308 445 ntBASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Gm20534-201ENSMUST00000172957 172 ntBASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Gm23287-201ENSMUST00000179427 116 ntBASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Gm23143-201ENSMUST00000180137 116 ntBASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Gm28002-201ENSMUST00000184832 100 ntBASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Gm29389-201ENSMUST00000191562 352 ntBASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Gm18410-201ENSMUST00000207199 577 ntBASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Gm18228-201ENSMUST00000217297 1091 ntBASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Vmn1r89-206ENSMUST00000227319 985 ntBASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Gm23738-201ENSMUST00000082828 171 ntBASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Gm24871-201ENSMUST00000083099 116 ntBASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Gm22970-201ENSMUST00000083304 186 ntBASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Gm22739-201ENSMUST00000083437 160 ntBASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Rnu5g-201ENSMUST00000093721 116 ntBASIC3.21□□□□□ -1.9
Clhc1Q5M6W3 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 Gm25420-201ENSMUST00000104216 127 ntBASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 Gm14939-201ENSMUST00000120347 680 ntBASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 Gm13692-201ENSMUST00000120774 371 ntBASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 Gm22026-201ENSMUST00000122735 281 ntBASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 Gm24998-201ENSMUST00000157908 89 ntBASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 Gm25026-201ENSMUST00000175017 188 ntBASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 Mir5136-201ENSMUST00000175573 76 ntBASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 Gm26866-201ENSMUST00000180414 802 ntBASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 Gm26701-201ENSMUST00000181571 234 ntBASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 Gm6680-201ENSMUST00000192789 950 ntBASIC3.2□□□□□ -1.9
Clhc1Q5M6W3 Gm37523-201ENSMUST00000194901 412 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms