Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.27□□□□□ -1.89
Usp28Q5I043 Gm8681-201ENSMUST00000219115 618 ntBASIC3.27□□□□□ -1.89
Usp28Q5I043 AC154788.1-201ENSMUST00000225003 340 ntBASIC3.27□□□□□ -1.89
Usp28Q5I043 AC131068.1-201ENSMUST00000226891 482 ntBASIC3.27□□□□□ -1.89
Usp28Q5I043 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Usp28Q5I043 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Usp28Q5I043 Gm23628-201ENSMUST00000082464 173 ntBASIC3.27□□□□□ -1.89
Usp28Q5I043 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Usp28Q5I043 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Usp28Q5I043 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Usp28Q5I043 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Usp28Q5I043 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.27□□□□□ -1.89
Usp28Q5I043 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.27□□□□□ -1.89
Usp28Q5I043 Gm9597-202ENSMUST00000227632 1387 ntBASIC3.26□□□□□ -1.89
Usp28Q5I043 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC3.26□□□□□ -1.89
Usp28Q5I043 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Usp28Q5I043 Gm16171-201ENSMUST00000118004 324 ntBASIC3.26□□□□□ -1.89
Usp28Q5I043 Gm11843-201ENSMUST00000118984 425 ntBASIC3.26□□□□□ -1.89
Usp28Q5I043 Gm14877-201ENSMUST00000119803 478 ntBASIC3.26□□□□□ -1.89
Usp28Q5I043 Gm11404-201ENSMUST00000120872 494 ntBASIC3.26□□□□□ -1.89
Usp28Q5I043 Gm15488-201ENSMUST00000121682 670 ntBASIC3.26□□□□□ -1.89
Usp28Q5I043 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC3.26□□□□□ -1.89
Usp28Q5I043 Gm14903-201ENSMUST00000122435 537 ntBASIC3.26□□□□□ -1.89
Usp28Q5I043 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.26□□□□□ -1.89
Usp28Q5I043 Gm24666-201ENSMUST00000158937 167 ntBASIC3.26□□□□□ -1.89
Usp28Q5I043 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC3.26□□□□□ -1.89
Usp28Q5I043 Gm20526-201ENSMUST00000173416 158 ntBASIC3.26□□□□□ -1.89
Usp28Q5I043 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
Usp28Q5I043 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Usp28Q5I043 Gm7897-201ENSMUST00000193981 554 ntBASIC3.26□□□□□ -1.89
Usp28Q5I043 Gm18384-201ENSMUST00000195974 808 ntBASIC3.26□□□□□ -1.89
Usp28Q5I043 Gm43704-201ENSMUST00000196164 496 ntBASIC3.26□□□□□ -1.89
Usp28Q5I043 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.26□□□□□ -1.89
Usp28Q5I043 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC3.26□□□□□ -1.89
Usp28Q5I043 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
Usp28Q5I043 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Usp28Q5I043 AC124433.2-201ENSMUST00000223867 291 ntBASIC3.26□□□□□ -1.89
Usp28Q5I043 AC124489.2-201ENSMUST00000223930 589 ntBASIC3.26□□□□□ -1.89
Usp28Q5I043 AC154257.2-201ENSMUST00000224166 340 ntBASIC3.26□□□□□ -1.89
Usp28Q5I043 CT025525.1-201ENSMUST00000226325 1054 ntBASIC3.26□□□□□ -1.89
Usp28Q5I043 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.26□□□□□ -1.89
Usp28Q5I043 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.26□□□□□ -1.89
Usp28Q5I043 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.26□□□□□ -1.89
Usp28Q5I043 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Usp28Q5I043 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Usp28Q5I043 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Usp28Q5I043 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.26□□□□□ -1.89
Usp28Q5I043 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Usp28Q5I043 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC3.26□□□□□ -1.89
Usp28Q5I043 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
Usp28Q5I043 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
Usp28Q5I043 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Usp28Q5I043 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Usp28Q5I043 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC3.25□□□□□ -1.89
Usp28Q5I043 Gm15159-201ENSMUST00000117062 764 ntBASIC3.25□□□□□ -1.89
Usp28Q5I043 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
Usp28Q5I043 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.25□□□□□ -1.89
Usp28Q5I043 Gm15126-201ENSMUST00000118631 833 ntBASIC3.25□□□□□ -1.89
Usp28Q5I043 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Usp28Q5I043 Gm23409-201ENSMUST00000158516 237 ntBASIC3.25□□□□□ -1.89
Usp28Q5I043 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Usp28Q5I043 Gm25944-201ENSMUST00000178758 94 ntBASIC3.25□□□□□ -1.89
Usp28Q5I043 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.25□□□□□ -1.89
Usp28Q5I043 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.25□□□□□ -1.89
Usp28Q5I043 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Usp28Q5I043 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC3.25□□□□□ -1.89
Usp28Q5I043 Gm45063-201ENSMUST00000203726 472 ntBASIC3.25□□□□□ -1.89
Usp28Q5I043 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.25□□□□□ -1.89
Usp28Q5I043 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC3.25□□□□□ -1.89
Usp28Q5I043 Gm4528-201ENSMUST00000207905 551 ntBASIC3.25□□□□□ -1.89
Usp28Q5I043 Gm44594-201ENSMUST00000208982 407 ntBASIC3.25□□□□□ -1.89
Usp28Q5I043 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC3.25□□□□□ -1.89
Usp28Q5I043 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC3.25□□□□□ -1.89
Usp28Q5I043 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Usp28Q5I043 Gm18557-201ENSMUST00000218710 433 ntBASIC3.25□□□□□ -1.89
Usp28Q5I043 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.25□□□□□ -1.89
Usp28Q5I043 Gm30738-201ENSMUST00000221346 502 ntBASIC3.25□□□□□ -1.89
Usp28Q5I043 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC3.25□□□□□ -1.89
Usp28Q5I043 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC3.25□□□□□ -1.89
Usp28Q5I043 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.25□□□□□ -1.89
Usp28Q5I043 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.25□□□□□ -1.89
Usp28Q5I043 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Usp28Q5I043 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Usp28Q5I043 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Usp28Q5I043 Gm42701-201ENSMUST00000196117 1657 ntBASIC3.24□□□□□ -1.89
Usp28Q5I043 Snord14c-201ENSMUST00000101927 86 ntBASIC3.24□□□□□ -1.89
Usp28Q5I043 Gm25097-201ENSMUST00000104042 145 ntBASIC3.24□□□□□ -1.89
Usp28Q5I043 Gm24340-201ENSMUST00000104208 97 ntBASIC3.24□□□□□ -1.89
Usp28Q5I043 Gm13803-201ENSMUST00000117547 489 ntBASIC3.24□□□□□ -1.89
Usp28Q5I043 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC3.24□□□□□ -1.89
Usp28Q5I043 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.24□□□□□ -1.89
Usp28Q5I043 Gm16100-201ENSMUST00000120489 231 ntBASIC3.24□□□□□ -1.89
Usp28Q5I043 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC3.24□□□□□ -1.89
Usp28Q5I043 Mup-ps17-201ENSMUST00000120723 218 ntBASIC3.24□□□□□ -1.89
Usp28Q5I043 Gm15272-201ENSMUST00000120865 233 ntBASIC3.24□□□□□ -1.89
Usp28Q5I043 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC3.24□□□□□ -1.89
Usp28Q5I043 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC3.24□□□□□ -1.89
Usp28Q5I043 Gm24314-201ENSMUST00000158274 123 ntBASIC3.24□□□□□ -1.89
Usp28Q5I043 Gm24553-201ENSMUST00000158653 131 ntBASIC3.24□□□□□ -1.89
Usp28Q5I043 Gm7094-201ENSMUST00000178379 366 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms