Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm15975-201ENSMUST00000122385 1402 ntBASIC4.12□□□□□ -1.75
Ccdc88bQ4QRL3 Gm7195-201ENSMUST00000190869 1707 ntBASIC4.12□□□□□ -1.75
Ccdc88bQ4QRL3 Gm37903-201ENSMUST00000192122 2381 ntBASIC4.12□□□□□ -1.75
Ccdc88bQ4QRL3 Gm13728-201ENSMUST00000117471 400 ntBASIC4.11□□□□□ -1.75
Ccdc88bQ4QRL3 Gm15025-201ENSMUST00000118434 418 ntBASIC4.11□□□□□ -1.75
Ccdc88bQ4QRL3 Gm11285-201ENSMUST00000118443 322 ntBASIC4.11□□□□□ -1.75
Ccdc88bQ4QRL3 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Ccdc88bQ4QRL3 Gm38283-201ENSMUST00000193041 695 ntBASIC4.11□□□□□ -1.75
Ccdc88bQ4QRL3 Mir3073b-201ENSMUST00000199383 60 ntBASIC4.11□□□□□ -1.75
Ccdc88bQ4QRL3 Mir497-201ENSMUST00000200557 84 ntBASIC4.11□□□□□ -1.75
Ccdc88bQ4QRL3 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Ccdc88bQ4QRL3 Gm44680-201ENSMUST00000208414 2910 ntBASIC4.11□□□□□ -1.75
Ccdc88bQ4QRL3 Gm16355-201ENSMUST00000128606 231 ntBASIC4.11□□□□□ -1.75
Ccdc88bQ4QRL3 Gm21999-201ENSMUST00000165985 387 ntBASIC4.11□□□□□ -1.75
Ccdc88bQ4QRL3 Gm29610-201ENSMUST00000187749 453 ntBASIC4.11□□□□□ -1.75
Ccdc88bQ4QRL3 Gm19224-201ENSMUST00000190477 793 ntBASIC4.11□□□□□ -1.75
Ccdc88bQ4QRL3 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC4.11□□□□□ -1.75
Ccdc88bQ4QRL3 Gm45150-201ENSMUST00000206051 467 ntBASIC4.11□□□□□ -1.75
Ccdc88bQ4QRL3 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Ccdc88bQ4QRL3 AC129017.1-201ENSMUST00000228363 270 ntBASIC4.11□□□□□ -1.75
Ccdc88bQ4QRL3 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC4.11□□□□□ -1.75
Ccdc88bQ4QRL3 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Ccdc88bQ4QRL3 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Ccdc88bQ4QRL3 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.11□□□□□ -1.75
Ccdc88bQ4QRL3 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc88bQ4QRL3 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc88bQ4QRL3 Gm16017-201ENSMUST00000119834 208 ntBASIC4.1□□□□□ -1.75
Ccdc88bQ4QRL3 Gm23548-201ENSMUST00000158963 106 ntBASIC4.1□□□□□ -1.75
Ccdc88bQ4QRL3 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc88bQ4QRL3 Gm18595-201ENSMUST00000175736 1068 ntBASIC4.1□□□□□ -1.75
Ccdc88bQ4QRL3 Gm28637-201ENSMUST00000179424 345 ntBASIC4.1□□□□□ -1.75
Ccdc88bQ4QRL3 Gm27330-201ENSMUST00000184689 132 ntBASIC4.1□□□□□ -1.75
Ccdc88bQ4QRL3 Gm19257-201ENSMUST00000186121 183 ntBASIC4.1□□□□□ -1.75
Ccdc88bQ4QRL3 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.1□□□□□ -1.75
Ccdc88bQ4QRL3 Gm43427-201ENSMUST00000198188 331 ntBASIC4.1□□□□□ -1.75
Ccdc88bQ4QRL3 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc88bQ4QRL3 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc88bQ4QRL3 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Ccdc88bQ4QRL3 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Ccdc88bQ4QRL3 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Ccdc88bQ4QRL3 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Ccdc88bQ4QRL3 Gm5653-201ENSMUST00000223393 1337 ntBASIC4.09□□□□□ -1.75
Ccdc88bQ4QRL3 Mir542-201ENSMUST00000102186 85 ntBASIC4.09□□□□□ -1.75
Ccdc88bQ4QRL3 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC4.09□□□□□ -1.75
Ccdc88bQ4QRL3 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.09□□□□□ -1.75
Ccdc88bQ4QRL3 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC4.09□□□□□ -1.75
Ccdc88bQ4QRL3 Gm37579-201ENSMUST00000194291 142 ntBASIC4.09□□□□□ -1.75
Ccdc88bQ4QRL3 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Ccdc88bQ4QRL3 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC4.09□□□□□ -1.75
Ccdc88bQ4QRL3 AC125350.4-201ENSMUST00000225895 273 ntBASIC4.09□□□□□ -1.75
Ccdc88bQ4QRL3 AC137902.2-201ENSMUST00000227989 576 ntBASIC4.09□□□□□ -1.75
Ccdc88bQ4QRL3 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Ccdc88bQ4QRL3 Hmgb1l-201ENSMUST00000082150 571 ntBASIC4.09□□□□□ -1.75
Ccdc88bQ4QRL3 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Ccdc88bQ4QRL3 Gm14429-201ENSMUST00000121881 2024 ntBASIC4.09□□□□□ -1.76
Ccdc88bQ4QRL3 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Ccdc88bQ4QRL3 Gm12849-201ENSMUST00000120013 739 ntBASIC4.08□□□□□ -1.76
Ccdc88bQ4QRL3 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ccdc88bQ4QRL3 Gm22257-201ENSMUST00000158687 301 ntBASIC4.08□□□□□ -1.76
Ccdc88bQ4QRL3 Mir6997-201ENSMUST00000184313 71 ntBASIC4.08□□□□□ -1.76
Ccdc88bQ4QRL3 Gm18985-201ENSMUST00000196472 1079 ntBASIC4.08□□□□□ -1.76
Ccdc88bQ4QRL3 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC4.08□□□□□ -1.76
Ccdc88bQ4QRL3 AC153899.1-201ENSMUST00000214092 1117 ntBASIC4.08□□□□□ -1.76
Ccdc88bQ4QRL3 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Ccdc88bQ4QRL3 Gm21379-201ENSMUST00000179772 1955 ntBASIC4.08□□□□□ -1.76
Ccdc88bQ4QRL3 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ccdc88bQ4QRL3 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ccdc88bQ4QRL3 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ccdc88bQ4QRL3 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ccdc88bQ4QRL3 Gm37470-201ENSMUST00000193378 2798 ntBASIC4.07□□□□□ -1.76
Ccdc88bQ4QRL3 Gm14159-201ENSMUST00000119832 451 ntBASIC4.07□□□□□ -1.76
Ccdc88bQ4QRL3 Gm17711-201ENSMUST00000172028 237 ntBASIC4.07□□□□□ -1.76
Ccdc88bQ4QRL3 Gm8807-201ENSMUST00000179328 492 ntBASIC4.07□□□□□ -1.76
Ccdc88bQ4QRL3 Gm26622-201ENSMUST00000180520 298 ntBASIC4.07□□□□□ -1.76
Ccdc88bQ4QRL3 Gm42484-201ENSMUST00000196075 2104 ntBASIC4.07□□□□□ -1.76
Ccdc88bQ4QRL3 Gm45072-201ENSMUST00000208673 929 ntBASIC4.07□□□□□ -1.76
Ccdc88bQ4QRL3 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Ccdc88bQ4QRL3 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Ccdc88bQ4QRL3 Gm25421-201ENSMUST00000104218 164 ntBASIC4.06□□□□□ -1.76
Ccdc88bQ4QRL3 Gm14125-201ENSMUST00000113442 680 ntBASIC4.06□□□□□ -1.76
Ccdc88bQ4QRL3 Gm16383-201ENSMUST00000118122 232 ntBASIC4.06□□□□□ -1.76
Ccdc88bQ4QRL3 Gm15195-201ENSMUST00000118775 263 ntBASIC4.06□□□□□ -1.76
Ccdc88bQ4QRL3 Gm23980-201ENSMUST00000157135 158 ntBASIC4.06□□□□□ -1.76
Ccdc88bQ4QRL3 Gm7592-201ENSMUST00000160674 627 ntBASIC4.06□□□□□ -1.76
Ccdc88bQ4QRL3 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Ccdc88bQ4QRL3 Gm43922-201ENSMUST00000205071 328 ntBASIC4.06□□□□□ -1.76
Ccdc88bQ4QRL3 AC160999.1-201ENSMUST00000225675 810 ntBASIC4.06□□□□□ -1.76
Ccdc88bQ4QRL3 Gm12492-201ENSMUST00000117665 564 ntBASIC4.05□□□□□ -1.76
Ccdc88bQ4QRL3 Gm6565-201ENSMUST00000121217 438 ntBASIC4.05□□□□□ -1.76
Ccdc88bQ4QRL3 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC4.05□□□□□ -1.76
Ccdc88bQ4QRL3 Gm38216-201ENSMUST00000194872 1214 ntBASIC4.05□□□□□ -1.76
Ccdc88bQ4QRL3 Gm4528-201ENSMUST00000207905 551 ntBASIC4.05□□□□□ -1.76
Ccdc88bQ4QRL3 Gm18015-201ENSMUST00000214879 316 ntBASIC4.05□□□□□ -1.76
Ccdc88bQ4QRL3 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Ccdc88bQ4QRL3 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Ccdc88bQ4QRL3 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Ccdc88bQ4QRL3 Gm24690-201ENSMUST00000157759 97 ntBASIC4.05□□□□□ -1.76
Ccdc88bQ4QRL3 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Ccdc88bQ4QRL3 Mir7039-201ENSMUST00000183852 85 ntBASIC4.05□□□□□ -1.76
Ccdc88bQ4QRL3 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC4.05□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms