Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.27□□□□□ -1.89
Trafd1Q3UDK1 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Trafd1Q3UDK1 Gm45071-201ENSMUST00000205353 571 ntBASIC3.27□□□□□ -1.89
Trafd1Q3UDK1 Gm36776-201ENSMUST00000207006 203 ntBASIC3.27□□□□□ -1.89
Trafd1Q3UDK1 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC3.27□□□□□ -1.89
Trafd1Q3UDK1 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC3.27□□□□□ -1.89
Trafd1Q3UDK1 AC124489.2-201ENSMUST00000223930 589 ntBASIC3.27□□□□□ -1.89
Trafd1Q3UDK1 AC166369.1-201ENSMUST00000228126 351 ntBASIC3.27□□□□□ -1.89
Trafd1Q3UDK1 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Trafd1Q3UDK1 Gm4987-201ENSMUST00000078326 408 ntBASIC3.27□□□□□ -1.89
Trafd1Q3UDK1 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Trafd1Q3UDK1 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.27□□□□□ -1.89
Trafd1Q3UDK1 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Trafd1Q3UDK1 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trafd1Q3UDK1 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.27□□□□□ -1.89
Trafd1Q3UDK1 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trafd1Q3UDK1 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Trafd1Q3UDK1 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 AC164297.6-201ENSMUST00000224643 1568 ntBASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Gm26423-201ENSMUST00000104277 128 ntBASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Gm23175-201ENSMUST00000104371 132 ntBASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Gm14825-201ENSMUST00000113538 701 ntBASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Gm24831-201ENSMUST00000116778 126 ntBASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Gm15951-201ENSMUST00000118377 400 ntBASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Gm13873-201ENSMUST00000119208 427 ntBASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Gm14238-201ENSMUST00000120227 323 ntBASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Gm14591-201ENSMUST00000120407 518 ntBASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Gm25066-201ENSMUST00000158145 123 ntBASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Gm25519-201ENSMUST00000158392 127 ntBASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Gm22910-201ENSMUST00000178568 132 ntBASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Gm29064-201ENSMUST00000187014 813 ntBASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Gm18505-201ENSMUST00000187360 790 ntBASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Gm6064-201ENSMUST00000203999 454 ntBASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Gm29920-201ENSMUST00000206876 754 ntBASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Gm39147-201ENSMUST00000211376 465 ntBASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Gm45409-201ENSMUST00000211486 252 ntBASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Gm2544-201ENSMUST00000222702 756 ntBASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Gm5471-201ENSMUST00000072732 337 ntBASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Gm7648-201ENSMUST00000173036 1658 ntBASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
Trafd1Q3UDK1 Gm38278-201ENSMUST00000194715 1365 ntBASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Gm37965-201ENSMUST00000195304 1362 ntBASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Gm23431-201ENSMUST00000104006 107 ntBASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Gm15110-201ENSMUST00000117545 881 ntBASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Gm14795-201ENSMUST00000118461 471 ntBASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Gm9043-201ENSMUST00000119677 314 ntBASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Gm11252-201ENSMUST00000120572 939 ntBASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Gm22345-201ENSMUST00000122644 107 ntBASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Gm15733-201ENSMUST00000132957 242 ntBASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Gm24666-201ENSMUST00000158937 167 ntBASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Gm18354-201ENSMUST00000173515 1068 ntBASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Gm27964-201ENSMUST00000185195 62 ntBASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Gm37213-201ENSMUST00000193077 586 ntBASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Trafd1Q3UDK1 Gm43975-201ENSMUST00000203023 481 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms