Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm45048-201ENSMUST00000207058 429 ntBASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Gm45162-201ENSMUST00000209013 618 ntBASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC3.64□□□□□ -1.83
Brf2Q3UAW9 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC3.64□□□□□ -1.83
Brf2Q3UAW9 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.64□□□□□ -1.83
Brf2Q3UAW9 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Gm43793-201ENSMUST00000201645 1333 ntBASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.64□□□□□ -1.83
Brf2Q3UAW9 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Gm22072-201ENSMUST00000116850 121 ntBASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Gm12393-201ENSMUST00000117084 848 ntBASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Gm14899-201ENSMUST00000118673 548 ntBASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Gm11991-201ENSMUST00000119652 1074 ntBASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Gm12640-201ENSMUST00000120097 310 ntBASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Gm14982-201ENSMUST00000121102 442 ntBASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Gm11506-201ENSMUST00000122414 470 ntBASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Gm22988-201ENSMUST00000122759 144 ntBASIC3.63□□□□□ -1.83
Brf2Q3UAW9 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Gm16327-201ENSMUST00000137146 228 ntBASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Gm24014-201ENSMUST00000157728 157 ntBASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Gm23415-201ENSMUST00000175519 83 ntBASIC3.63□□□□□ -1.83
Brf2Q3UAW9 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Gm26556-201ENSMUST00000180645 320 ntBASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Gm27580-201ENSMUST00000183666 149 ntBASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Gm29550-201ENSMUST00000185543 285 ntBASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Gm18956-201ENSMUST00000192857 480 ntBASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Gm38088-201ENSMUST00000195829 241 ntBASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Gm45031-201ENSMUST00000206800 288 ntBASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC3.63□□□□□ -1.83
Brf2Q3UAW9 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.63□□□□□ -1.83
Brf2Q3UAW9 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Brf2Q3UAW9 AC165146.1-201ENSMUST00000223777 900 ntBASIC3.63□□□□□ -1.83
Brf2Q3UAW9 AC138667.2-201ENSMUST00000224880 598 ntBASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Brf2Q3UAW9 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Gm9818-201ENSMUST00000050900 255 ntBASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Brf2Q3UAW9 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.63□□□□□ -1.83
Brf2Q3UAW9 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Brf2Q3UAW9 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.63□□□□□ -1.83
Brf2Q3UAW9 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Gm43718-201ENSMUST00000197524 1857 ntBASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Brf2Q3UAW9 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Gm23133-201ENSMUST00000104255 135 ntBASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Gm23118-201ENSMUST00000122657 187 ntBASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Gm22059-201ENSMUST00000157544 104 ntBASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Gm23591-201ENSMUST00000157663 286 ntBASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Gm24503-201ENSMUST00000158454 135 ntBASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Nron-204ENSMUST00000158971 370 ntBASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC3.62□□□□□ -1.83
Brf2Q3UAW9 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Brf2Q3UAW9 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Gm25451-201ENSMUST00000177832 121 ntBASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Gm6625-201ENSMUST00000177870 272 ntBASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Mir6414-201ENSMUST00000183685 82 ntBASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Gm28615-201ENSMUST00000187527 482 ntBASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Gm29263-201ENSMUST00000188718 463 ntBASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Gm6651-201ENSMUST00000189471 271 ntBASIC3.62□□□□□ -1.83
Brf2Q3UAW9 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms