Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Usp39Q3TIX9 AC120375.2-201ENSMUST00000226532 1853 ntBASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Gm25097-201ENSMUST00000104042 145 ntBASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Gm13386-201ENSMUST00000117677 124 ntBASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Gm13475-201ENSMUST00000119290 234 ntBASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Gm14815-201ENSMUST00000120060 488 ntBASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Gm12543-201ENSMUST00000120410 543 ntBASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Gm12924-201ENSMUST00000121747 318 ntBASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Gm25784-201ENSMUST00000122524 81 ntBASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Gm25427-201ENSMUST00000157605 103 ntBASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Gm25706-201ENSMUST00000157828 247 ntBASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Gm22136-201ENSMUST00000158751 268 ntBASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Gm21850-201ENSMUST00000179792 359 ntBASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Gm21991-201ENSMUST00000180006 508 ntBASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Gm25412-201ENSMUST00000180258 107 ntBASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Gm27611-201ENSMUST00000184690 108 ntBASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Gm27190-201ENSMUST00000184890 542 ntBASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Gm28830-201ENSMUST00000188192 213 ntBASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Gm29229-201ENSMUST00000188874 323 ntBASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Gm37878-201ENSMUST00000192108 387 ntBASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Gm37601-201ENSMUST00000194922 394 ntBASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Gm43828-201ENSMUST00000196890 639 ntBASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Gm44389-201ENSMUST00000203795 182 ntBASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Gm18194-201ENSMUST00000210455 481 ntBASIC4.33□□□□□ -1.72
Usp39Q3TIX9 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Gm3338-201ENSMUST00000220982 269 ntBASIC4.33□□□□□ -1.72
Usp39Q3TIX9 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC4.33□□□□□ -1.72
Usp39Q3TIX9 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.33□□□□□ -1.72
Usp39Q3TIX9 CT025157.1-201ENSMUST00000226241 292 ntBASIC4.33□□□□□ -1.72
Usp39Q3TIX9 AC166369.1-201ENSMUST00000228126 351 ntBASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Usp39Q3TIX9 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Usp39Q3TIX9 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Gm13082-201ENSMUST00000118877 561 ntBASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Gm13228-201ENSMUST00000118937 634 ntBASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Gm14736-201ENSMUST00000121470 336 ntBASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Gm25827-201ENSMUST00000157089 107 ntBASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Gm6486-201ENSMUST00000166202 434 ntBASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Gm27165-201ENSMUST00000183951 232 ntBASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Gm27161-201ENSMUST00000183960 562 ntBASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Gm18505-201ENSMUST00000187360 790 ntBASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Gm29038-201ENSMUST00000191543 678 ntBASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Gm37961-201ENSMUST00000192729 299 ntBASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Gm38008-201ENSMUST00000195333 518 ntBASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Ighv12-1-201ENSMUST00000195542 329 ntBASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Gm37836-201ENSMUST00000195875 175 ntBASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Gm44474-201ENSMUST00000196525 127 ntBASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Gm17951-201ENSMUST00000198536 496 ntBASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Gm18423-201ENSMUST00000205144 1074 ntBASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Gm29754-201ENSMUST00000206269 358 ntBASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Gm44655-201ENSMUST00000207768 423 ntBASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Gm45387-201ENSMUST00000209792 632 ntBASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Gm8423-201ENSMUST00000211387 607 ntBASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Gm45402-201ENSMUST00000211796 223 ntBASIC4.32□□□□□ -1.72
Usp39Q3TIX9 AC152415.1-201ENSMUST00000213320 440 ntBASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Gm18442-201ENSMUST00000220925 639 ntBASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Usp39Q3TIX9 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Gm42843-201ENSMUST00000196328 3616 ntBASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.32□□□□□ -1.72
Usp39Q3TIX9 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Usp39Q3TIX9 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Gm42537-201ENSMUST00000198260 2574 ntBASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.31□□□□□ -1.72
Usp39Q3TIX9 Gm22021-201ENSMUST00000104353 107 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms