Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Gm14390-201ENSMUST00000117505 1695 ntBASIC3.61□□□□□ -1.83
Cdx4Q07424 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Cdx4Q07424 Gm42552-201ENSMUST00000196754 4497 ntBASIC3.61□□□□□ -1.83
Cdx4Q07424 Gm38259-201ENSMUST00000194602 3534 ntBASIC3.61□□□□□ -1.83
Cdx4Q07424 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Cdx4Q07424 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC3.6□□□□□ -1.83
Cdx4Q07424 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cdx4Q07424 Gm18360-201ENSMUST00000173327 1524 ntBASIC3.6□□□□□ -1.83
Cdx4Q07424 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Cdx4Q07424 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Cdx4Q07424 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Cdx4Q07424 Gm14359-201ENSMUST00000118883 424 ntBASIC3.6□□□□□ -1.83
Cdx4Q07424 Gm2005-201ENSMUST00000120759 542 ntBASIC3.6□□□□□ -1.83
Cdx4Q07424 Gm15267-201ENSMUST00000120888 464 ntBASIC3.6□□□□□ -1.83
Cdx4Q07424 Gm14977-201ENSMUST00000121626 812 ntBASIC3.6□□□□□ -1.83
Cdx4Q07424 Gm12693-201ENSMUST00000121965 483 ntBASIC3.6□□□□□ -1.83
Cdx4Q07424 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Cdx4Q07424 Gm7846-201ENSMUST00000145844 274 ntBASIC3.6□□□□□ -1.83
Cdx4Q07424 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.6□□□□□ -1.83
Cdx4Q07424 Gm14527-201ENSMUST00000179300 639 ntBASIC3.6□□□□□ -1.83
Cdx4Q07424 Gm28283-201ENSMUST00000185509 178 ntBASIC3.6□□□□□ -1.83
Cdx4Q07424 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC3.6□□□□□ -1.83
Cdx4Q07424 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.6□□□□□ -1.83
Cdx4Q07424 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC3.6□□□□□ -1.83
Cdx4Q07424 Igkv12-40-201ENSMUST00000199208 347 ntBASIC3.6□□□□□ -1.83
Cdx4Q07424 Gm43941-201ENSMUST00000203303 1073 ntBASIC3.6□□□□□ -1.83
Cdx4Q07424 Gm44171-201ENSMUST00000203701 2109 ntBASIC3.6□□□□□ -1.83
Cdx4Q07424 Gm44858-201ENSMUST00000207360 154 ntBASIC3.6□□□□□ -1.83
Cdx4Q07424 Gm45614-201ENSMUST00000209994 721 ntBASIC3.6□□□□□ -1.83
Cdx4Q07424 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC3.6□□□□□ -1.83
Cdx4Q07424 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC3.6□□□□□ -1.83
Cdx4Q07424 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC3.6□□□□□ -1.83
Cdx4Q07424 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC3.6□□□□□ -1.83
Cdx4Q07424 AL606513.1-201ENSMUST00000225369 579 ntBASIC3.6□□□□□ -1.83
Cdx4Q07424 AC154592.1-201ENSMUST00000225784 574 ntBASIC3.6□□□□□ -1.83
Cdx4Q07424 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Cdx4Q07424 Gm6065-201ENSMUST00000081336 492 ntBASIC3.6□□□□□ -1.83
Cdx4Q07424 Gm22826-201ENSMUST00000083774 165 ntBASIC3.6□□□□□ -1.83
Cdx4Q07424 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC3.6□□□□□ -1.83
Cdx4Q07424 Gm6043-201ENSMUST00000099961 492 ntBASIC3.6□□□□□ -1.83
Cdx4Q07424 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cdx4Q07424 Gm8675-201ENSMUST00000201408 1856 ntBASIC3.6□□□□□ -1.83
Cdx4Q07424 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cdx4Q07424 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
Cdx4Q07424 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Cdx4Q07424 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.83
Cdx4Q07424 AC126439.1-201ENSMUST00000226772 2104 ntBASIC3.59□□□□□ -1.83
Cdx4Q07424 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
Cdx4Q07424 Gm36298-201ENSMUST00000223394 1732 ntBASIC3.59□□□□□ -1.83
Cdx4Q07424 Gm42494-201ENSMUST00000196515 3051 ntBASIC3.59□□□□□ -1.83
Cdx4Q07424 Mir208b-201ENSMUST00000104735 77 ntBASIC3.59□□□□□ -1.83
Cdx4Q07424 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Cdx4Q07424 Gm12379-201ENSMUST00000119607 391 ntBASIC3.59□□□□□ -1.83
Cdx4Q07424 Gm13132-201ENSMUST00000121194 472 ntBASIC3.59□□□□□ -1.83
Cdx4Q07424 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC3.59□□□□□ -1.83
Cdx4Q07424 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC3.59□□□□□ -1.83
Cdx4Q07424 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Cdx4Q07424 Mir1947-201ENSMUST00000158235 85 ntBASIC3.59□□□□□ -1.83
Cdx4Q07424 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC3.59□□□□□ -1.83
Cdx4Q07424 Gm25194-201ENSMUST00000177987 79 ntBASIC3.59□□□□□ -1.83
Cdx4Q07424 Gm28872-201ENSMUST00000191518 158 ntBASIC3.59□□□□□ -1.83
Cdx4Q07424 Gm37495-201ENSMUST00000194590 264 ntBASIC3.59□□□□□ -1.83
Cdx4Q07424 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.59□□□□□ -1.83
Cdx4Q07424 Gm43415-201ENSMUST00000201934 750 ntBASIC3.59□□□□□ -1.83
Cdx4Q07424 Gm44402-201ENSMUST00000203677 238 ntBASIC3.59□□□□□ -1.83
Cdx4Q07424 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC3.59□□□□□ -1.83
Cdx4Q07424 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Cdx4Q07424 Gm45651-201ENSMUST00000210857 335 ntBASIC3.59□□□□□ -1.83
Cdx4Q07424 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Cdx4Q07424 Gm18507-201ENSMUST00000218855 525 ntBASIC3.59□□□□□ -1.83
Cdx4Q07424 Gm8249-201ENSMUST00000219225 465 ntBASIC3.59□□□□□ -1.83
Cdx4Q07424 AC166358.7-201ENSMUST00000221132 108 ntBASIC3.59□□□□□ -1.83
Cdx4Q07424 AC125543.5-201ENSMUST00000222799 108 ntBASIC3.59□□□□□ -1.83
Cdx4Q07424 AC158982.2-201ENSMUST00000226283 184 ntBASIC3.59□□□□□ -1.83
Cdx4Q07424 Gm23678-201ENSMUST00000083157 107 ntBASIC3.59□□□□□ -1.83
Cdx4Q07424 Gm23461-201ENSMUST00000083265 107 ntBASIC3.59□□□□□ -1.83
Cdx4Q07424 Gm25821-201ENSMUST00000093657 133 ntBASIC3.59□□□□□ -1.83
Cdx4Q07424 Gm16261-201ENSMUST00000096813 205 ntBASIC3.59□□□□□ -1.83
Cdx4Q07424 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC3.59□□□□□ -1.83
Cdx4Q07424 Gm42537-201ENSMUST00000198260 2574 ntBASIC3.59□□□□□ -1.83
Cdx4Q07424 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Cdx4Q07424 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Cdx4Q07424 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Cdx4Q07424 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.84
Cdx4Q07424 Gm16332-201ENSMUST00000134229 2967 ntBASIC3.59□□□□□ -1.84
Cdx4Q07424 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
Cdx4Q07424 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.59□□□□□ -1.84
Cdx4Q07424 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Cdx4Q07424 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Cdx4Q07424 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC3.58□□□□□ -1.84
Cdx4Q07424 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Cdx4Q07424 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Cdx4Q07424 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Cdx4Q07424 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Cdx4Q07424 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC3.58□□□□□ -1.84
Cdx4Q07424 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Cdx4Q07424 Gm37899-201ENSMUST00000193116 8717 ntBASIC3.58□□□□□ -1.84
Cdx4Q07424 Gm24338-201ENSMUST00000104205 127 ntBASIC3.58□□□□□ -1.84
Cdx4Q07424 Gm12261-201ENSMUST00000117499 645 ntBASIC3.58□□□□□ -1.84
Cdx4Q07424 Gm12112-201ENSMUST00000117772 231 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms