Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Shmt1P50431 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC4.55□□□□□ -1.68
Shmt1P50431 Gm45375-201ENSMUST00000210338 280 ntBASIC4.55□□□□□ -1.68
Shmt1P50431 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC4.55□□□□□ -1.68
Shmt1P50431 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC4.55□□□□□ -1.68
Shmt1P50431 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Shmt1P50431 Gm18488-201ENSMUST00000215082 364 ntBASIC4.55□□□□□ -1.68
Shmt1P50431 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.55□□□□□ -1.68
Shmt1P50431 AC132384.5-201ENSMUST00000218562 226 ntBASIC4.55□□□□□ -1.68
Shmt1P50431 AC152946.2-201ENSMUST00000219071 337 ntBASIC4.55□□□□□ -1.68
Shmt1P50431 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.55□□□□□ -1.68
Shmt1P50431 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.55□□□□□ -1.68
Shmt1P50431 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.55□□□□□ -1.68
Shmt1P50431 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Shmt1P50431 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Shmt1P50431 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC4.55□□□□□ -1.68
Shmt1P50431 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC4.55□□□□□ -1.68
Shmt1P50431 Gm23939-201ENSMUST00000082880 133 ntBASIC4.55□□□□□ -1.68
Shmt1P50431 Gm23460-201ENSMUST00000083258 109 ntBASIC4.55□□□□□ -1.68
Shmt1P50431 Mir99a-201ENSMUST00000083596 65 ntBASIC4.55□□□□□ -1.68
Shmt1P50431 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.55□□□□□ -1.68
Shmt1P50431 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
Shmt1P50431 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Shmt1P50431 Gm38065-201ENSMUST00000193147 3492 ntBASIC4.55□□□□□ -1.68
Shmt1P50431 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Shmt1P50431 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Shmt1P50431 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.54□□□□□ -1.68
Shmt1P50431 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Shmt1P50431 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC4.54□□□□□ -1.68
Shmt1P50431 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Shmt1P50431 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Shmt1P50431 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Shmt1P50431 Gm11784-201ENSMUST00000118568 474 ntBASIC4.54□□□□□ -1.68
Shmt1P50431 Gm12803-201ENSMUST00000118907 821 ntBASIC4.54□□□□□ -1.68
Shmt1P50431 Gm16017-201ENSMUST00000119834 208 ntBASIC4.54□□□□□ -1.68
Shmt1P50431 Gm14364-201ENSMUST00000129209 267 ntBASIC4.54□□□□□ -1.68
Shmt1P50431 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC4.54□□□□□ -1.68
Shmt1P50431 Gm23124-201ENSMUST00000157650 107 ntBASIC4.54□□□□□ -1.68
Shmt1P50431 Gm17109-201ENSMUST00000163985 358 ntBASIC4.54□□□□□ -1.68
Shmt1P50431 Gm22242-201ENSMUST00000175224 118 ntBASIC4.54□□□□□ -1.68
Shmt1P50431 Gm25284-201ENSMUST00000180345 141 ntBASIC4.54□□□□□ -1.68
Shmt1P50431 Gm27640-201ENSMUST00000184580 147 ntBASIC4.54□□□□□ -1.68
Shmt1P50431 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC4.54□□□□□ -1.68
Shmt1P50431 Npn2-202ENSMUST00000189275 235 ntBASIC4.54□□□□□ -1.68
Shmt1P50431 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC4.54□□□□□ -1.68
Shmt1P50431 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC4.54□□□□□ -1.68
Shmt1P50431 Gm17781-201ENSMUST00000195232 649 ntBASIC4.54□□□□□ -1.68
Shmt1P50431 Gm43652-201ENSMUST00000196219 675 ntBASIC4.54□□□□□ -1.68
Shmt1P50431 Gm42758-201ENSMUST00000202146 283 ntBASIC4.54□□□□□ -1.68
Shmt1P50431 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC4.54□□□□□ -1.68
Shmt1P50431 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC4.54□□□□□ -1.68
Shmt1P50431 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC4.54□□□□□ -1.68
Shmt1P50431 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
Shmt1P50431 CT010455.1-201ENSMUST00000218579 413 ntBASIC4.54□□□□□ -1.68
Shmt1P50431 Gm31931-201ENSMUST00000219666 222 ntBASIC4.54□□□□□ -1.68
Shmt1P50431 AC154506.1-201ENSMUST00000225178 621 ntBASIC4.54□□□□□ -1.68
Shmt1P50431 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Shmt1P50431 Gm23447-201ENSMUST00000082798 163 ntBASIC4.54□□□□□ -1.68
Shmt1P50431 Gm25126-201ENSMUST00000083343 102 ntBASIC4.54□□□□□ -1.68
Shmt1P50431 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Shmt1P50431 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC4.54□□□□□ -1.68
Shmt1P50431 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC4.54□□□□□ -1.68
Shmt1P50431 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Shmt1P50431 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Shmt1P50431 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.54□□□□□ -1.68
Shmt1P50431 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Shmt1P50431 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Shmt1P50431 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
Shmt1P50431 AC123705.2-201ENSMUST00000221653 2009 ntBASIC4.53□□□□□ -1.68
Shmt1P50431 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Shmt1P50431 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.53□□□□□ -1.68
Shmt1P50431 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.53□□□□□ -1.68
Shmt1P50431 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC4.53□□□□□ -1.68
Shmt1P50431 Gm22758-201ENSMUST00000102275 96 ntBASIC4.53□□□□□ -1.68
Shmt1P50431 Mir676-201ENSMUST00000102443 89 ntBASIC4.53□□□□□ -1.68
Shmt1P50431 Gm14897-201ENSMUST00000118213 207 ntBASIC4.53□□□□□ -1.68
Shmt1P50431 Gm22208-201ENSMUST00000122658 110 ntBASIC4.53□□□□□ -1.68
Shmt1P50431 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC4.53□□□□□ -1.68
Shmt1P50431 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC4.53□□□□□ -1.68
Shmt1P50431 Gm22716-201ENSMUST00000177596 107 ntBASIC4.53□□□□□ -1.68
Shmt1P50431 Gm25314-201ENSMUST00000178810 79 ntBASIC4.53□□□□□ -1.68
Shmt1P50431 Gm23144-201ENSMUST00000180226 107 ntBASIC4.53□□□□□ -1.68
Shmt1P50431 Gm28304-201ENSMUST00000185977 312 ntBASIC4.53□□□□□ -1.68
Shmt1P50431 Gm29256-201ENSMUST00000189094 312 ntBASIC4.53□□□□□ -1.68
Shmt1P50431 Gm29428-201ENSMUST00000190086 409 ntBASIC4.53□□□□□ -1.68
Shmt1P50431 Gm28484-201ENSMUST00000190606 312 ntBASIC4.53□□□□□ -1.68
Shmt1P50431 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC4.53□□□□□ -1.68
Shmt1P50431 Trbv12-3-201ENSMUST00000192675 372 ntBASIC4.53□□□□□ -1.68
Shmt1P50431 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC4.53□□□□□ -1.68
Shmt1P50431 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Shmt1P50431 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Shmt1P50431 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.53□□□□□ -1.68
Shmt1P50431 Gm4045-201ENSMUST00000204076 310 ntBASIC4.53□□□□□ -1.68
Shmt1P50431 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC4.53□□□□□ -1.68
Shmt1P50431 Gm22229-201ENSMUST00000082987 108 ntBASIC4.53□□□□□ -1.68
Shmt1P50431 Gm23510-201ENSMUST00000083083 163 ntBASIC4.53□□□□□ -1.68
Shmt1P50431 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Shmt1P50431 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Shmt1P50431 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Shmt1P50431 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms