Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Rfx1P48377 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Rfx1P48377 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Rfx1P48377 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
Rfx1P48377 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Rfx1P48377 Gm37180-201ENSMUST00000195335 2819 ntBASIC5.64□□□□□ -1.51
Rfx1P48377 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Rfx1P48377 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Rfx1P48377 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.63□□□□□ -1.51
Rfx1P48377 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Rfx1P48377 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
Rfx1P48377 Gm24230-201ENSMUST00000104313 129 ntBASIC5.63□□□□□ -1.51
Rfx1P48377 Gm7164-201ENSMUST00000117503 450 ntBASIC5.63□□□□□ -1.51
Rfx1P48377 Gm12118-201ENSMUST00000119766 532 ntBASIC5.63□□□□□ -1.51
Rfx1P48377 Gm14852-201ENSMUST00000120065 647 ntBASIC5.63□□□□□ -1.51
Rfx1P48377 Gm8880-201ENSMUST00000121800 454 ntBASIC5.63□□□□□ -1.51
Rfx1P48377 Gm22106-201ENSMUST00000122544 127 ntBASIC5.63□□□□□ -1.51
Rfx1P48377 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Rfx1P48377 Gm24216-201ENSMUST00000158259 117 ntBASIC5.63□□□□□ -1.51
Rfx1P48377 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC5.63□□□□□ -1.51
Rfx1P48377 Mir3090-201ENSMUST00000175597 87 ntBASIC5.63□□□□□ -1.51
Rfx1P48377 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC5.63□□□□□ -1.51
Rfx1P48377 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Rfx1P48377 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Rfx1P48377 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Rfx1P48377 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Rfx1P48377 Gm29320-201ENSMUST00000185235 615 ntBASIC5.63□□□□□ -1.51
Rfx1P48377 Gm29179-202ENSMUST00000186138 615 ntBASIC5.63□□□□□ -1.51
Rfx1P48377 Gm29448-201ENSMUST00000186675 615 ntBASIC5.63□□□□□ -1.51
Rfx1P48377 Gm29314-201ENSMUST00000186800 615 ntBASIC5.63□□□□□ -1.51
Rfx1P48377 Gm28253-202ENSMUST00000187971 615 ntBASIC5.63□□□□□ -1.51
Rfx1P48377 Gm29169-201ENSMUST00000189835 615 ntBASIC5.63□□□□□ -1.51
Rfx1P48377 Gm38150-201ENSMUST00000192996 452 ntBASIC5.63□□□□□ -1.51
Rfx1P48377 Gm43554-201ENSMUST00000199987 186 ntBASIC5.63□□□□□ -1.51
Rfx1P48377 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC5.63□□□□□ -1.51
Rfx1P48377 Gm44776-201ENSMUST00000207212 381 ntBASIC5.63□□□□□ -1.51
Rfx1P48377 Gm44648-201ENSMUST00000208267 329 ntBASIC5.63□□□□□ -1.51
Rfx1P48377 Gm9512-201ENSMUST00000223112 497 ntBASIC5.63□□□□□ -1.51
Rfx1P48377 AC129308.2-201ENSMUST00000224588 789 ntBASIC5.63□□□□□ -1.51
Rfx1P48377 AC154583.1-201ENSMUST00000224788 655 ntBASIC5.63□□□□□ -1.51
Rfx1P48377 Ear-ps9-202ENSMUST00000226796 245 ntBASIC5.63□□□□□ -1.51
Rfx1P48377 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Rfx1P48377 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Rfx1P48377 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Rfx1P48377 Gm15170-201ENSMUST00000121593 2023 ntBASIC5.63□□□□□ -1.51
Rfx1P48377 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Rfx1P48377 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Rfx1P48377 AC122887.2-201ENSMUST00000219465 1603 ntBASIC5.63□□□□□ -1.51
Rfx1P48377 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Rfx1P48377 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC5.62□□□□□ -1.51
Rfx1P48377 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Rfx1P48377 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Rfx1P48377 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Rfx1P48377 Gm11408-201ENSMUST00000117889 519 ntBASIC5.62□□□□□ -1.51
Rfx1P48377 Gm11862-201ENSMUST00000119678 659 ntBASIC5.62□□□□□ -1.51
Rfx1P48377 Gm12768-201ENSMUST00000120055 759 ntBASIC5.62□□□□□ -1.51
Rfx1P48377 Gm14601-201ENSMUST00000120892 236 ntBASIC5.62□□□□□ -1.51
Rfx1P48377 Gm13232-201ENSMUST00000121816 632 ntBASIC5.62□□□□□ -1.51
Rfx1P48377 n-R5s192-201ENSMUST00000122577 119 ntBASIC5.62□□□□□ -1.51
Rfx1P48377 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Rfx1P48377 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Rfx1P48377 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC5.62□□□□□ -1.51
Rfx1P48377 Gm26347-201ENSMUST00000157526 131 ntBASIC5.62□□□□□ -1.51
Rfx1P48377 Gm23579-201ENSMUST00000158528 103 ntBASIC5.62□□□□□ -1.51
Rfx1P48377 Gm2389-201ENSMUST00000160487 189 ntBASIC5.62□□□□□ -1.51
Rfx1P48377 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Rfx1P48377 Gm5558-201ENSMUST00000178933 495 ntBASIC5.62□□□□□ -1.51
Rfx1P48377 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC5.62□□□□□ -1.51
Rfx1P48377 Gm44391-201ENSMUST00000198490 93 ntBASIC5.62□□□□□ -1.51
Rfx1P48377 Igkv12-66-201ENSMUST00000199305 348 ntBASIC5.62□□□□□ -1.51
Rfx1P48377 Gm44076-201ENSMUST00000203072 520 ntBASIC5.62□□□□□ -1.51
Rfx1P48377 Gm7825-201ENSMUST00000204046 416 ntBASIC5.62□□□□□ -1.51
Rfx1P48377 Gm19252-201ENSMUST00000204705 305 ntBASIC5.62□□□□□ -1.51
Rfx1P48377 Gm44879-201ENSMUST00000207007 503 ntBASIC5.62□□□□□ -1.51
Rfx1P48377 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC5.62□□□□□ -1.51
Rfx1P48377 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Rfx1P48377 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC5.62□□□□□ -1.51
Rfx1P48377 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Rfx1P48377 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC5.62□□□□□ -1.51
Rfx1P48377 Gm6065-201ENSMUST00000081336 492 ntBASIC5.62□□□□□ -1.51
Rfx1P48377 Gm23330-201ENSMUST00000082660 164 ntBASIC5.62□□□□□ -1.51
Rfx1P48377 Gm26121-201ENSMUST00000083364 162 ntBASIC5.62□□□□□ -1.51
Rfx1P48377 Gm24764-201ENSMUST00000083686 199 ntBASIC5.62□□□□□ -1.51
Rfx1P48377 Gm22577-201ENSMUST00000083731 109 ntBASIC5.62□□□□□ -1.51
Rfx1P48377 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Rfx1P48377 Gm14429-201ENSMUST00000121881 2024 ntBASIC5.62□□□□□ -1.51
Rfx1P48377 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Rfx1P48377 AC121844.2-201ENSMUST00000219067 2066 ntBASIC5.62□□□□□ -1.51
Rfx1P48377 AC158805.1-201ENSMUST00000218197 2631 ntBASIC5.61□□□□□ -1.51
Rfx1P48377 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Rfx1P48377 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC5.61□□□□□ -1.51
Rfx1P48377 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Rfx1P48377 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Rfx1P48377 Gm11971-201ENSMUST00000117715 288 ntBASIC5.61□□□□□ -1.51
Rfx1P48377 Gm16205-201ENSMUST00000117720 1027 ntBASIC5.61□□□□□ -1.51
Rfx1P48377 Gm15095-201ENSMUST00000118996 1430 ntBASIC5.61□□□□□ -1.51
Rfx1P48377 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Rfx1P48377 Gm15147-201ENSMUST00000122263 483 ntBASIC5.61□□□□□ -1.51
Rfx1P48377 n-R5s80-201ENSMUST00000122596 111 ntBASIC5.61□□□□□ -1.51
Rfx1P48377 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 116.2 ms