Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm11344-201ENSMUST00000122011 335 ntBASIC3.11□□□□□ -1.91
Cxcl12P40224 Gm23205-201ENSMUST00000158671 103 ntBASIC3.11□□□□□ -1.91
Cxcl12P40224 Ear-ps7-201ENSMUST00000161287 442 ntBASIC3.11□□□□□ -1.91
Cxcl12P40224 Gm28920-201ENSMUST00000189957 699 ntBASIC3.11□□□□□ -1.91
Cxcl12P40224 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.11□□□□□ -1.91
Cxcl12P40224 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.11□□□□□ -1.91
Cxcl12P40224 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC3.11□□□□□ -1.91
Cxcl12P40224 AC171206.2-201ENSMUST00000215252 389 ntBASIC3.11□□□□□ -1.91
Cxcl12P40224 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC3.11□□□□□ -1.91
Cxcl12P40224 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.11□□□□□ -1.91
Cxcl12P40224 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.11□□□□□ -1.91
Cxcl12P40224 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.11□□□□□ -1.91
Cxcl12P40224 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Cxcl12P40224 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Cxcl12P40224 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Cxcl12P40224 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Cxcl12P40224 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC3.11□□□□□ -1.91
Cxcl12P40224 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Cxcl12P40224 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Cxcl12P40224 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
Cxcl12P40224 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Cxcl12P40224 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Cxcl12P40224 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC3.1□□□□□ -1.91
Cxcl12P40224 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Cxcl12P40224 Gm37652-201ENSMUST00000195290 2095 ntBASIC3.1□□□□□ -1.91
Cxcl12P40224 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Cxcl12P40224 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Cxcl12P40224 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Cxcl12P40224 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Cxcl12P40224 Gm22543-201ENSMUST00000104347 94 ntBASIC3.1□□□□□ -1.91
Cxcl12P40224 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.1□□□□□ -1.91
Cxcl12P40224 Mir291a-201ENSMUST00000104815 82 ntBASIC3.1□□□□□ -1.91
Cxcl12P40224 Gm13607-201ENSMUST00000117875 539 ntBASIC3.1□□□□□ -1.91
Cxcl12P40224 Gm13717-201ENSMUST00000119868 365 ntBASIC3.1□□□□□ -1.91
Cxcl12P40224 Gm24937-201ENSMUST00000122597 134 ntBASIC3.1□□□□□ -1.91
Cxcl12P40224 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC3.1□□□□□ -1.91
Cxcl12P40224 Gm25280-201ENSMUST00000157269 101 ntBASIC3.1□□□□□ -1.91
Cxcl12P40224 Gm24922-201ENSMUST00000158511 102 ntBASIC3.1□□□□□ -1.91
Cxcl12P40224 Gm17153-201ENSMUST00000171314 490 ntBASIC3.1□□□□□ -1.91
Cxcl12P40224 Gm24111-201ENSMUST00000175491 97 ntBASIC3.1□□□□□ -1.91
Cxcl12P40224 Gm22392-201ENSMUST00000177971 107 ntBASIC3.1□□□□□ -1.91
Cxcl12P40224 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.1□□□□□ -1.91
Cxcl12P40224 Gm18486-201ENSMUST00000184040 298 ntBASIC3.1□□□□□ -1.91
Cxcl12P40224 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.1□□□□□ -1.91
Cxcl12P40224 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC3.1□□□□□ -1.91
Cxcl12P40224 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.1□□□□□ -1.91
Cxcl12P40224 Gm28788-201ENSMUST00000189717 375 ntBASIC3.1□□□□□ -1.91
Cxcl12P40224 Gm29558-201ENSMUST00000190134 375 ntBASIC3.1□□□□□ -1.91
Cxcl12P40224 Gm19620-201ENSMUST00000195972 434 ntBASIC3.1□□□□□ -1.91
Cxcl12P40224 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC3.1□□□□□ -1.91
Cxcl12P40224 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC3.1□□□□□ -1.91
Cxcl12P40224 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
Cxcl12P40224 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.1□□□□□ -1.91
Cxcl12P40224 AC151843.1-201ENSMUST00000215960 691 ntBASIC3.1□□□□□ -1.91
Cxcl12P40224 CT025680.1-201ENSMUST00000217375 375 ntBASIC3.1□□□□□ -1.91
Cxcl12P40224 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.1□□□□□ -1.91
Cxcl12P40224 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.1□□□□□ -1.91
Cxcl12P40224 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC3.1□□□□□ -1.91
Cxcl12P40224 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Cxcl12P40224 Gm4017-201ENSMUST00000084813 338 ntBASIC3.1□□□□□ -1.91
Cxcl12P40224 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Cxcl12P40224 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.1□□□□□ -1.91
Cxcl12P40224 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Cxcl12P40224 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Cxcl12P40224 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.09□□□□□ -1.91
Cxcl12P40224 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.09□□□□□ -1.91
Cxcl12P40224 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Cxcl12P40224 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Cxcl12P40224 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.09□□□□□ -1.91
Cxcl12P40224 Gm23128-201ENSMUST00000104257 132 ntBASIC3.09□□□□□ -1.91
Cxcl12P40224 Gm22019-201ENSMUST00000104359 96 ntBASIC3.09□□□□□ -1.91
Cxcl12P40224 Gm26342-201ENSMUST00000104557 129 ntBASIC3.09□□□□□ -1.91
Cxcl12P40224 Gm5384-201ENSMUST00000120313 463 ntBASIC3.09□□□□□ -1.91
Cxcl12P40224 Gm23792-201ENSMUST00000122557 93 ntBASIC3.09□□□□□ -1.91
Cxcl12P40224 Gm3025-201ENSMUST00000163454 489 ntBASIC3.09□□□□□ -1.91
Cxcl12P40224 Gm17063-201ENSMUST00000168135 456 ntBASIC3.09□□□□□ -1.91
Cxcl12P40224 Gm2878-201ENSMUST00000170173 486 ntBASIC3.09□□□□□ -1.91
Cxcl12P40224 Gm22693-201ENSMUST00000175049 442 ntBASIC3.09□□□□□ -1.91
Cxcl12P40224 Gm21809-201ENSMUST00000178495 468 ntBASIC3.09□□□□□ -1.91
Cxcl12P40224 Gm27718-201ENSMUST00000183721 86 ntBASIC3.09□□□□□ -1.91
Cxcl12P40224 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.09□□□□□ -1.91
Cxcl12P40224 Gm19694-201ENSMUST00000192364 505 ntBASIC3.09□□□□□ -1.91
Cxcl12P40224 Gm23128-202ENSMUST00000196578 133 ntBASIC3.09□□□□□ -1.91
Cxcl12P40224 Gm44343-201ENSMUST00000196702 90 ntBASIC3.09□□□□□ -1.91
Cxcl12P40224 Gm42919-201ENSMUST00000197753 1284 ntBASIC3.09□□□□□ -1.91
Cxcl12P40224 Gm43531-201ENSMUST00000200676 1114 ntBASIC3.09□□□□□ -1.91
Cxcl12P40224 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.09□□□□□ -1.91
Cxcl12P40224 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.09□□□□□ -1.91
Cxcl12P40224 AC133598.4-202ENSMUST00000225267 469 ntBASIC3.09□□□□□ -1.91
Cxcl12P40224 AC132833.3-201ENSMUST00000227472 866 ntBASIC3.09□□□□□ -1.91
Cxcl12P40224 Gm6462-201ENSMUST00000081488 304 ntBASIC3.09□□□□□ -1.91
Cxcl12P40224 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Cxcl12P40224 Gm10343-201ENSMUST00000096279 348 ntBASIC3.09□□□□□ -1.91
Cxcl12P40224 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Cxcl12P40224 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
Cxcl12P40224 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
Cxcl12P40224 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
Cxcl12P40224 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
Cxcl12P40224 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.09□□□□□ -1.92
Cxcl12P40224 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms