Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC4.1□□□□□ -1.75
Traf1P39428 Gm14008-201ENSMUST00000120483 274 ntBASIC4.1□□□□□ -1.75
Traf1P39428 Gm15147-201ENSMUST00000122263 483 ntBASIC4.1□□□□□ -1.75
Traf1P39428 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Traf1P39428 Gm16129-201ENSMUST00000152628 486 ntBASIC4.1□□□□□ -1.75
Traf1P39428 Gm23583-201ENSMUST00000158533 289 ntBASIC4.1□□□□□ -1.75
Traf1P39428 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Traf1P39428 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC4.1□□□□□ -1.75
Traf1P39428 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC4.1□□□□□ -1.75
Traf1P39428 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC4.1□□□□□ -1.75
Traf1P39428 Gm29389-201ENSMUST00000191562 352 ntBASIC4.1□□□□□ -1.75
Traf1P39428 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC4.1□□□□□ -1.75
Traf1P39428 Gm44076-201ENSMUST00000203072 520 ntBASIC4.1□□□□□ -1.75
Traf1P39428 Gm44332-201ENSMUST00000203712 433 ntBASIC4.1□□□□□ -1.75
Traf1P39428 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC4.1□□□□□ -1.75
Traf1P39428 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC4.1□□□□□ -1.75
Traf1P39428 Gm18903-201ENSMUST00000215343 480 ntBASIC4.1□□□□□ -1.75
Traf1P39428 Gm18228-201ENSMUST00000217297 1091 ntBASIC4.1□□□□□ -1.75
Traf1P39428 AC102575.1-201ENSMUST00000225348 547 ntBASIC4.1□□□□□ -1.75
Traf1P39428 n-R5s50-201ENSMUST00000083168 111 ntBASIC4.1□□□□□ -1.75
Traf1P39428 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Traf1P39428 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Traf1P39428 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Traf1P39428 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Traf1P39428 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Traf1P39428 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Traf1P39428 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Traf1P39428 Gm4855-201ENSMUST00000192270 1967 ntBASIC4.09□□□□□ -1.75
Traf1P39428 Gm16431-201ENSMUST00000117454 431 ntBASIC4.09□□□□□ -1.75
Traf1P39428 Gm12118-201ENSMUST00000119766 532 ntBASIC4.09□□□□□ -1.75
Traf1P39428 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC4.09□□□□□ -1.75
Traf1P39428 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Traf1P39428 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC4.09□□□□□ -1.75
Traf1P39428 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC4.09□□□□□ -1.75
Traf1P39428 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC4.09□□□□□ -1.75
Traf1P39428 Gm23667-201ENSMUST00000157466 120 ntBASIC4.09□□□□□ -1.75
Traf1P39428 Gm25519-201ENSMUST00000158392 127 ntBASIC4.09□□□□□ -1.75
Traf1P39428 Gm15946-201ENSMUST00000160654 423 ntBASIC4.09□□□□□ -1.75
Traf1P39428 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
Traf1P39428 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC4.09□□□□□ -1.75
Traf1P39428 Gm5527-201ENSMUST00000179821 642 ntBASIC4.09□□□□□ -1.75
Traf1P39428 Gm22307-201ENSMUST00000180019 107 ntBASIC4.09□□□□□ -1.75
Traf1P39428 Gm7909-201ENSMUST00000182688 614 ntBASIC4.09□□□□□ -1.75
Traf1P39428 Gm27308-201ENSMUST00000184807 233 ntBASIC4.09□□□□□ -1.75
Traf1P39428 Zfp-ps-201ENSMUST00000185025 478 ntBASIC4.09□□□□□ -1.75
Traf1P39428 Gm18667-201ENSMUST00000186523 484 ntBASIC4.09□□□□□ -1.75
Traf1P39428 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
Traf1P39428 Gm42796-201ENSMUST00000199913 1087 ntBASIC4.09□□□□□ -1.75
Traf1P39428 Gm44824-201ENSMUST00000207021 229 ntBASIC4.09□□□□□ -1.75
Traf1P39428 Gm45530-201ENSMUST00000211658 225 ntBASIC4.09□□□□□ -1.75
Traf1P39428 AC123835.1-201ENSMUST00000214362 670 ntBASIC4.09□□□□□ -1.75
Traf1P39428 AC159476.2-201ENSMUST00000216221 418 ntBASIC4.09□□□□□ -1.75
Traf1P39428 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC4.09□□□□□ -1.75
Traf1P39428 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC4.09□□□□□ -1.75
Traf1P39428 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Traf1P39428 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Traf1P39428 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Traf1P39428 Gm43498-201ENSMUST00000202002 1486 ntBASIC4.09□□□□□ -1.75
Traf1P39428 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Traf1P39428 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Traf1P39428 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Traf1P39428 Gm40020-201ENSMUST00000215677 1635 ntBASIC4.09□□□□□ -1.76
Traf1P39428 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
Traf1P39428 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
Traf1P39428 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Traf1P39428 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Traf1P39428 Gm23530-201ENSMUST00000104564 137 ntBASIC4.08□□□□□ -1.76
Traf1P39428 Mir294-201ENSMUST00000104710 84 ntBASIC4.08□□□□□ -1.76
Traf1P39428 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC4.08□□□□□ -1.76
Traf1P39428 Gm14825-201ENSMUST00000113538 701 ntBASIC4.08□□□□□ -1.76
Traf1P39428 Gm5762-201ENSMUST00000119204 258 ntBASIC4.08□□□□□ -1.76
Traf1P39428 Gm12137-201ENSMUST00000119565 346 ntBASIC4.08□□□□□ -1.76
Traf1P39428 Gm14463-201ENSMUST00000121117 498 ntBASIC4.08□□□□□ -1.76
Traf1P39428 Gm23257-201ENSMUST00000158322 132 ntBASIC4.08□□□□□ -1.76
Traf1P39428 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC4.08□□□□□ -1.76
Traf1P39428 Gm27445-201ENSMUST00000184484 72 ntBASIC4.08□□□□□ -1.76
Traf1P39428 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Traf1P39428 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Traf1P39428 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC4.08□□□□□ -1.76
Traf1P39428 Gm20162-201ENSMUST00000193629 871 ntBASIC4.08□□□□□ -1.76
Traf1P39428 Ighv1-6-201ENSMUST00000193849 293 ntBASIC4.08□□□□□ -1.76
Traf1P39428 Gm37575-201ENSMUST00000195467 309 ntBASIC4.08□□□□□ -1.76
Traf1P39428 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC4.08□□□□□ -1.76
Traf1P39428 Gm42621-201ENSMUST00000198114 275 ntBASIC4.08□□□□□ -1.76
Traf1P39428 Gm7652-201ENSMUST00000200440 1151 ntBASIC4.08□□□□□ -1.76
Traf1P39428 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Traf1P39428 Gm32381-201ENSMUST00000203192 476 ntBASIC4.08□□□□□ -1.76
Traf1P39428 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Traf1P39428 Gm5322-201ENSMUST00000206142 699 ntBASIC4.08□□□□□ -1.76
Traf1P39428 Gm29920-201ENSMUST00000206876 754 ntBASIC4.08□□□□□ -1.76
Traf1P39428 Gm19709-201ENSMUST00000215403 482 ntBASIC4.08□□□□□ -1.76
Traf1P39428 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Traf1P39428 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC4.08□□□□□ -1.76
Traf1P39428 AC124562.2-201ENSMUST00000223888 2313 ntBASIC4.08□□□□□ -1.76
Traf1P39428 Gnrh1-202ENSMUST00000223929 428 ntBASIC4.08□□□□□ -1.76
Traf1P39428 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Traf1P39428 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC4.08□□□□□ -1.76
Traf1P39428 Gm42547-201ENSMUST00000201159 3798 ntBASIC4.08□□□□□ -1.76
Traf1P39428 Gm44846-201ENSMUST00000207127 3243 ntBASIC4.07□□□□□ -1.76
Traf1P39428 Mir599-201ENSMUST00000102378 88 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms